Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2951 ATGGTGGTGGAGTTTGAGTACGAAGAGCTTGACGAAGCCACTGATAACTTCAACCCCACAAGGCTCATAGGCAAAGGAAGCCATGGATTGGTGTACAGAGGCATCTTCAAGCACAACAGTTTACAGATCGCTATAAAGAAGCCATCTCAGGGCCTTCAATCTCTCCACGACAACTCCAAGCTCGAAAACGAAATACGAGTCCTCTCGTCCCTTCCAGAAAACCCACACGTTCTTCGTCTCCTCGGCACTTGTCGCCATGCGCTCCACAACCACAACCTCCTCGTCATGCAGCTCATGCCCAACGGTTCCCTCCACGACTTGCTTCACCTCCCAACCCGAACCCCACTCGCGTGGCCGAAGCGCGTGGACACTGTCCTACGGATCGCGCGAGCGCTTCAGTTTCTCCACGAAAGAAAACCCGTCATCATCCACAGAGACGTCAAGTCTACGAACGTCTTGTTCGACTCTCACTGGAACGCTAAGCTAGCAGATTTCGGACTCGCCGTTTTGCACTCGGACGACTCACTGAGTCACCAGGTGAGCCAACCCGCCGGAACCATAGGTTACTTGGACCCATCGTACACCAACCCCGGCAAGCTGAGCACAAAGAACGACATTTTCAGTTTTGGGGTTTTGCTGTTGGAGATTGTGAGTTCCAGAAAGGCCATAGACGTGAACCGAACGCCGTCGTCGATCGTGGAGTGGGCGTTGCCGTTGATCGAACGCCAAGTGTTCGACGAAATGCATGACACCAGAATCGATATGCCTGCGAGCATGGCGAGAACCATCGGGAGGTTTCTTCGCGTGGCGGCTCGTTGCGTGGCAGCGAATGAGGACAAGCGGCCGGCGATCGGAGAGGTGGTCAAGGAAATGGAGGGATGTTTGGTTGAACGAGTTAGGTTTCCGATTTGGACGAGCGTTGTGAAGAGCGTGGCACGCTTGAGGAAGCGAAGAAGAAGAGTAGGAAAGGTTGAGGACGATCATGCCTCCACGTCCAGAGGGAAGCTATTGCTGAAAGAGGTGTTGCTGATGTAA 1035 0.5372 MVVEFEYEELDEATDNFNPTRLIGKGSHGLVYRGIFKHNSLQIAIKKPSQGLQSLHDNSKLENEIRVLSSLPENPHVLRLLGTCRHALHNHNLLVMQLMPNGSLHDLLHLPTRTPLAWPKRVDTVLRIARALQFLHERKPVIIHRDVKSTNVLFDSHWNAKLADFGLAVLHSDDSLSHQVSQPAGTIGYLDPSYTNPGKLSTKNDIFSFGVLLLEIVSSRKAIDVNRTPSSIVEWALPLIERQVFDEMHDTRIDMPASMARTIGRFLRVAARCVAANEDKRPAIGEVVKEMEGCLVERVRFPIWTSVVKSVARLRKRRRRVGKVEDDHASTSRGKLLLKEVLLM 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2951 344 Gene3D Transferase(Phosphotransferase) domain 1 99 301 - -
Dere02g2951 344 Pfam Protein tyrosine and serine/threonine kinase 21 290 IPR001245 GO:0004672|GO:0006468
Dere02g2951 344 PIRSF ILK 3 311 - -
Dere02g2951 344 SUPERFAMILY Protein kinase-like (PK-like) 5 306 IPR011009 -
Dere02g2951 344 ProSitePatterns Serine/Threonine protein kinases active-site signature. 142 154 IPR008271 GO:0004672|GO:0006468
Dere02g2951 344 SMART serkin_6 17 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g2951 344 ProSiteProfiles Protein kinase domain profile. 17 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g2951 344 PANTHER OS01G0253100 PROTEIN 4 293 - -
Dere02g2951 344 ProSitePatterns Protein kinases ATP-binding region signature. 23 47 IPR017441 GO:0005524
Dere02g2951 344 Gene3D Phosphorylase Kinase; domain 1 2 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2951 Dere-ChrDere02 33828574 33829608 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2951 5 322 Receptor kinase-like Gene Family AT3G59420 37.805 3.71e-63 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Dere02g2951 PK_Tyr_Ser-Thr 2.4e-39 CL0016