Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2947 ATGGGCTCCATCTCCATCCAAGCTGGCCTCTCTCGTTCTACTCCTTCTTCCTCTTCCTCTTCTTCCAATTCTTCTTCCTCATCGTCTTCCGCCGCTTCTGCGTCTGTTTCGTCCACAGCCGCCCCTCATCTCATTGACGCCTCCCTCGCCATCGCCACCAGATCTGAGCCCCACCCATCTACTCGATCTGCTCCCGTTCTCGATTCCAACAAGAAACCCCAAGTTCAGCAACAATTATCAATCTCTACTACGTCGGCGGCTGCGGGGGCGGTGGCTGCGACCCCGGCGAAGCGATCCACCAAGGACAGGCACACCAAGGTGGACGGTCGTGGCCGGAGAATTCGAATGCCGGCAACGTGTGCGGCTAGGGTTTTTCAATTGACCCGAGAACTGGGTCACAAGTCTGACGGAGAAACAATTGAGTGGCTGCTGCAGCAGGCGGAGCCGGCAATCATCGCCGCCACTGGCACGGGCACGATCCCGGCTAACATCTCGACTCTCAACGTTTCGCTCCGGAGCAGCGGGTCCACTCTCTCGGCTCCTCTGTCGAAGTCCGCTCCTCATACCTTCCATGGAGCTCTAGCCCTTTCCGCTCATCATCATCATCACCCCTACGAAGAAGCGTTCCAGCATTCCACTTTGTTAGGATTCCATCATCAACATCATCAACAACAACAACAACAACAGCAGCATCAGCATCATCTGTTGACCGCCGATCAAATTGCTGAAGCACTTCCGGGCGGCGGCGGGGGCGGAGAAGGAGACGGTGAGTCGACTGAGAGCTACATGAGAAAACGCTTCAGGGAAGATTTATTCAAAGACGAAGGTAATCAACAGCACAGCGAAAGCGGAGATGGTGGGAGTAATTCTCCTAAGGCATTCAAAACCGACTTGCAATTACAGAACCAACAACAACAACAGCAAGAAGGAGGAGGATCTTCGAATTCCAACATTCTTCGTCCTTCCAATTTACTCCCCGCCACCGCCATGTGGGCGGTGGCGCCTGCTCCGACCAGCGGCGGTGGGAGTGCTGTCGGTAGCACATTTTGGATGCTAACCCCCGGCGGTGGTGGTGCTGCCTCCGTCTCCGCCGTACCCACCGGCGGTTCCGGGTCTGCGGCATCATCTGAGATGACCCAGATGTGGCCATTCCCGACGGCGCAAACTGGTGGCGCCGTTAATGCGTTACAAGGTCCTCTGCAATTCATGCCCAGGTTCAATTTCCCCCATGGGAGTCTTGAGTTCCAAGGTGGTCGTGCAGGAGGAGGTCTTCAATTGGGGTCGATGATGTCGTTGATGCAGCCTCATCAGCAGCAGCAGCAGCCGTCGCAGCATCTGGGGCTTGGAATGTCTGACCAGACGAACCTGGGAATGCTCGCTGCTTTGAATGCTTACTCGAGAGCTGGTTTGAATGTGAATTCTGAACACCAGAATCACCCATTGGAGCATCATCATCAAGCTGCTGATAGTGGAGAAGAAGGTCCTAACAGTTCTCAGTGA 1500 0.552 MGSISIQAGLSRSTPSSSSSSSNSSSSSSSAASASVSSTAAPHLIDASLAIATRSEPHPSTRSAPVLDSNKKPQVQQQLSISTTSAAAGAVAATPAKRSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATGTGTIPANISTLNVSLRSSGSTLSAPLSKSAPHTFHGALALSAHHHHHPYEEAFQHSTLLGFHHQHHQQQQQQQQHQHHLLTADQIAEALPGGGGGGEGDGESTESYMRKRFREDLFKDEGNQQHSESGDGGSNSPKAFKTDLQLQNQQQQQQEGGGSSNSNILRPSNLLPATAMWAVAPAPTSGGGSAVGSTFWMLTPGGGGAASVSAVPTGGSGSAASSEMTQMWPFPTAQTGGAVNALQGPLQFMPRFNFPHGSLEFQGGRAGGGLQLGSMMSLMQPHQQQQQPSQHLGLGMSDQTNLGMLAALNAYSRAGLNVNSEHQNHPLEHHHQAADSGEEGPNSSQ 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2947 499 MobiDBLite consensus disorder prediction 281 321 - -
Dere02g2947 499 ProSiteProfiles TCP domain profile. 100 154 IPR017887 -
Dere02g2947 499 MobiDBLite consensus disorder prediction 1 42 - -
Dere02g2947 499 MobiDBLite consensus disorder prediction 274 321 - -
Dere02g2947 499 MobiDBLite consensus disorder prediction 97 112 - -
Dere02g2947 499 MobiDBLite consensus disorder prediction 1 112 - -
Dere02g2947 499 MobiDBLite consensus disorder prediction 475 499 - -
Dere02g2947 499 Pfam TCP family transcription factor 99 232 IPR017887 -
Dere02g2947 499 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 22 468 IPR005333 GO:0003700
Dere02g2947 499 MobiDBLite consensus disorder prediction 54 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2947 Dere-ChrDere02 33727367 33728866 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2947 97 397 TCP Transcription Factor Family AT1G35560 46.689 2.14e-64 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Dere02g2947 TCP 4.1e-39 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere02g2947 02 33727367 33728866 Dere02g2947 02 33727367 33728866 ECH