Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2932 ATGGCGTCTGCTAGCCTTGGAAATGGTGGGGCCAGCAGTTCCAGGTCTGTTAACGGCTTCAGGGGTTCGTCTAGTTCAGTGGATTGGCTTGGGAGAGAGATGCTTGAGTTGAGGTTGAGGGACAAGATTGACCATGATGAGGACAGAGATAGTGAGCCAGACATCATTGATGGAGTTGGTGCTGAAACAGGACATGTGATAAGAACTAGCATTGGTGGTCGAAATGGTCAATCTAGGCAGAATGTCAGTTACATTGCAGAACATGTGGTTGGGACAGGCTCTTTTGGCGTTGTCTTTCAAGCAAAATGTAGAGAAACTGGAGAGATTGTAGCCATCAAGAAGGTTCTCCAGGACAAGCGCTACAAGAACAGGGAGTTACAAATTATGCAAATGCTGGATCATCCAAATATTGTTGCCCTTAAGCATTGTTTCTTTTCAACAACTGACAAAGAAGAGCTTTACTTGAATCTTGTACTTGAATATGTTCCCGAAACTGTTAACCGCATTGCGAGGAACTATAGCAGGATTAACCAGCGAATGCCTTTAATATATGTTAAACTTTACACCTACCAGATTTGCAGGGCCCTTGCTTATATACATAATTGCATTGGAATATGTCATCGTGACATTAAGCCTCAGAACTTACTAGTGAACCCACACACACATCAGCTAAAACTTTGTGATTTTGGAAGTGCAAAAGTGTTGGTGAAAGGAGAACCCAATGTTTCTTACATCTGTTCAAGATACTACCGTGCTCCTGAGCTTATATTTGGTGCCACTGAGTATACAACTGCCATAGATATATGGTCAACTGGTTGTGTAATGGCTGAACTACTTCTTGGACAGCCTTTGTTTCCTGGAGAAAGTGGAGTTGATCAACTAGTTGAAATCATCAAGGTTTTGGGAACTCCAACAAGGGAAGAGATAAAGTGCATGAACCCAAATTATACTGAATTTAAGTTTCCGCAGATAAAACCTCATCCATGGCACAAGGTCTTTCAGAAACGTTTACCTCCAGAAGCAGTTGACCTTGTCTGCAGATTCTTTCAGTACTCTCCCAATTTACGATGCACTGCTTTGGAAGCTTGCATTCACCCCTTCTTTGATGAACTAAGGGACCCAAACACCCGCCTTCCTAATGGCCGCCCGCTTCCTCCTTTGTTTAATTTTAAATCTCAGGAGCTTGCGGGTATACCTCCTGATATCGTCAATCGTCTTATTCCAGAGCATGCTCGCTGTAAAGCTTCTGGTGCATCTGAGAAAGAATTTCACAGAAAGAGTTCCTAG 1287 0.4297 MASASLGNGGASSSRSVNGFRGSSSSVDWLGREMLELRLRDKIDHDEDRDSEPDIIDGVGAETGHVIRTSIGGRNGQSRQNVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRINQRMPLIYVKLYTYQICRALAYIHNCIGICHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNVSYICSRYYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACIHPFFDELRDPNTRLPNGRPLPPLFNFKSQELAGIPPDIVNRLIPEHARCKASGASEKEFHRKSS 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2932 428 SMART serkin_6 84 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g2932 428 ProSiteProfiles Protein kinase domain profile. 84 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g2932 428 FunFam Glycogen synthase kinase-3 beta 68 163 - -
Dere02g2932 428 ProSitePatterns Protein kinases ATP-binding region signature. 90 114 IPR017441 GO:0005524
Dere02g2932 428 Gene3D Transferase(Phosphotransferase) domain 1 164 412 - -
Dere02g2932 428 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Dere02g2932 428 SUPERFAMILY Protein kinase-like (PK-like) 83 394 IPR011009 -
Dere02g2932 428 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 53 412 - -
Dere02g2932 428 CDD STKc_GSK3 79 371 IPR039192 -
Dere02g2932 428 Pfam Protein kinase domain 86 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g2932 428 Gene3D Phosphorylase Kinase; domain 1 69 163 - -
Dere02g2932 428 FunFam Shaggy-related protein kinase kappa 164 412 - -
Dere02g2932 428 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2932 Dere-ChrDere02 33398924 33404845 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2932 90 371 Core Cell Cycle Gene Families AT1G76540 35.517 3.34e-57 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Dere02g2932 Pkinase 1.1e-64 CL0016