Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2921 ATGTGCACGATAGAGGCATCATTGTGGAAGGTCAAGGAGCATTGTGAGCATTACAAGACCATCAATTTTAAAGCCTCTTTATCATGGTTATCCAATAAGGTAGAGACAAGAGTGATGATGGTTCATATCGCAGCACTTGAGCTTCGGTGGAACGCCGGCACTATCTTGAATAAGAGCGGCACGTTTTTCTGTGAAGCCATGTCGCTGATCCTGCATGCTGGCAAAACAAACAAAAATGCATACAAGGCACTCATTGCCGCAGAGTACAGTGGTGTGCAAGTTAAATTGGCCCCAAATTTTGAGATGGTTGTTTCTAATAAAACTCCTGAATTTCTCAAGATGAATCCTATTGGCAAGGTTCCTGTGTTGGAAACACCAGATGGTCCAGTATTTGAGAGCAATGCCATTGCTCGCTATGTTGCTCGCTTGGAGGGTGACAATGCTTTGTATGGATCTTCTCCAATTGATTATGCTCACGTTGAACAATGGATTGATTTTTCGTCACTGGAGATTGATGCTAACATTATCGCCTGGTACAGAGGAAGAATGGGATACGGCCCTTACCTTCCTCCTGTTGAGGAAGCTGTAATTTCTGCATTGAAGAGAGCATTGGGTGCGTTGAATACTTACCTTGCCTCTAATACTTACCTGGTTGGGCATTGCGTGACCCTGGCTGACATTGTTACGACGTGCAATTTGTTTCTGGGGTTTACTCAGCTCATGACTAAGAGCTTCACCTTGGAGTTTCCTCATGTTGAGAGATACTTCTGGACCTTGGTCAATCAACCCAAATTCCATAAGATTTTAGGTGAGGTCAGGCAGACTGAAGCTGTCTTACCTATTCAATCGGTCCAGAAGCCCAAAGAATCTGCTAAAGCCAAGGCAAAGGACCAACCAAAGAAAGAGGCTAAGAAAGAGGCCAAAAAAGAGCCTGAAAAGCCCAAAGAAGAGGCAGAAGAGGAGGCACCCAAGCCCAAACCCAAGAATCCTCTTGACCTTCTTCCCCCAAGTAAGATGATATTGGATGAGTGGAAAAGACTCTACTCAAATACCAAGACCAACTTCCGAGAGGTTGCAATTAAAGGATTTTGGGACATGTATGACCCTGATGGATACTCTCTCTGGTTCTGTGATTACAAATACAACGATGAGAATACTGTTTCCTTTGTGACATTGAACAAGGTTAGTGGGTTTCTTCAGAGGATGGATCTTGCTCGCAAGTATGCATTTGGGAAAATGCTTGTGATTGGATCTGAGCCACCGTTTAAGGTGAAGGGGCTGTGGCTATTCCGTGGGCAAGAAATCCCACAATTTGTGATTGATGAATGCTATGACATGGAACTCTATGAATGGACTAAAGTTGACATCTCACATGAAGCTCAAAAGGAGCGTGTCAATCAGATGATTGAAGATTGCGAGCCTTTTGAGGGTCAGCCTCTTTTGGATGCCAAGTGCTTTAAGTGA 1464 0.4406 MCTIEASLWKVKEHCEHYKTINFKASLSWLSNKVETRVMMVHIAALELRWNAGTILNKSGTFFCEAMSLILHAGKTNKNAYKALIAAEYSGVQVKLAPNFEMVVSNKTPEFLKMNPIGKVPVLETPDGPVFESNAIARYVARLEGDNALYGSSPIDYAHVEQWIDFSSLEIDANIIAWYRGRMGYGPYLPPVEEAVISALKRALGALNTYLASNTYLVGHCVTLADIVTTCNLFLGFTQLMTKSFTLEFPHVERYFWTLVNQPKFHKILGEVRQTEAVLPIQSVQKPKESAKAKAKDQPKKEAKKEAKKEPEKPKEEAEEEAPKPKPKNPLDLLPPSKMILDEWKRLYSNTKTNFREVAIKGFWDMYDPDGYSLWFCDYKYNDENTVSFVTLNKVSGFLQRMDLARKYAFGKMLVIGSEPPFKVKGLWLFRGQEIPQFVIDECYDMELYEWTKVDISHEAQKERVNQMIEDCEPFEGQPLLDAKCFK 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2921 487 PANTHER ELONGATION FACTOR 1-GAMMA 1-RELATED 67 487 IPR044628 GO:0004364
Dere02g2921 487 Gene3D - 146 283 - -
Dere02g2921 487 MobiDBLite consensus disorder prediction 289 327 - -
Dere02g2921 487 Pfam Elongation factor 1 gamma, conserved domain 326 434 IPR001662 GO:0003746|GO:0006414
Dere02g2921 487 SUPERFAMILY GST C-terminal domain-like 139 277 IPR036282 -
Dere02g2921 487 SUPERFAMILY Thioredoxin-like 65 151 IPR036249 -
Dere02g2921 487 SUPERFAMILY eEF1-gamma domain 327 487 IPR036433 GO:0003746|GO:0006414
Dere02g2921 487 SMART EF1G_2 326 434 IPR001662 GO:0003746|GO:0006414
Dere02g2921 487 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 67 148 IPR004045 -
Dere02g2921 487 FunFam Elongation factor 1B gamma 67 140 - -
Dere02g2921 487 SFLD Glutathione Transferase (cytosolic) 71 256 IPR040079 -
Dere02g2921 487 SFLD Main (cytGST) 71 256 - -
Dere02g2921 487 FunFam Elongation factor 1 gamma 146 282 - -
Dere02g2921 487 Gene3D Glutaredoxin 66 140 - -
Dere02g2921 487 FunFam Elongation factor 1-gamma 1 327 487 - -
Dere02g2921 487 Gene3D Translation elongation factor EF1B, gamma chain, conserved domain 327 487 IPR036433 GO:0003746|GO:0006414
Dere02g2921 487 MobiDBLite consensus disorder prediction 288 334 - -
Dere02g2921 487 Pfam Glutathione S-transferase, C-terminal domain 198 263 IPR004046 -
Dere02g2921 487 CDD GST_C_EF1Bgamma_like 156 276 - -
Dere02g2921 487 Pfam Glutathione S-transferase, N-terminal domain 68 142 IPR004045 -
Dere02g2921 487 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 153 281 IPR010987 -
Dere02g2921 487 CDD GST_N_EF1Bgamma 71 143 - -
Dere02g2921 487 ProSiteProfiles Elongation factor 1 (EF-1) gamma C-terminal domain profile. 327 487 IPR001662 GO:0003746|GO:0006414
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2921 Dere-ChrDere02 33168315 33172285 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2921 67 487 Eukaryotic Initiation Factors Gene Family AT1G57720 71.496 0.0 619