Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2915 ATGGGTTGTATATGCTCGAAAGGGACATCTTCAAATGAATACGTTGCTGAGAACAATGTCAAGGACAAAGATACGAAAGCAAATAGGACCTCTAAACATCTGAGTACGGGGGAAAAGGTCGCAATAGATGCTGATGGCAGTGGTAATGATGCTACTGCACGTTTGATATCTAATCCGTCTCGGGATGGAAATTCAGGGTCCACTCCCATTTCATCAGATGAGGGGGAGAAGAATGGAGAGACTACTGCAAAGCCTGCAAAACAACTGGTTCATATGGCCTCAAACGTGGGAATTGGAAGTGGAGGACAAGGACAACCTAGGATGACTAGGATAGTTAGTGTAACCAAAGGGGAAACAGGAGCTCAGGTTCTTGCTGGCTGGCCTTCTTGGCTTACTGCAGTAGCAGGGGAAGCCATTAATGGTTGGATACCTCGCAGAGCAGACTCATTTGAGAAGTTGGAGAAGATTGGGCAAGGAACTTACAGCAGTGTATACAGAGCCCGTGATCTTGAAACAAATAAAATTGTTGCATTGAAGAAAGTTCGATTTGCTAATATGGATCCAGAAAGTGTTCGTTTTATGGCAAGAGAAATTATTGTATTGCGAAGGCTTGATCATCCAAATGTCATGAAGCTTGAAGGCATCATTACTTCAAGGATGTCTGGTAGCTTGTATCTTGTGTTTGAATATATGGAACATGATCTTGCAGGGCTTTCAGCTATACCTGGCATCAAGTTCACTGAAGCGCAGATCAAATGTTATATGCAACAGCTGCTTCGTGGTATTGAGCATTGCCACAGTCGTGGTGTTCTGCACCGAGACATCAAGGGCTCCAATCTTTTGATTGACAAGAATGGCAATCTAAAGATTGGTGATTTTGGGCTAGCAACTTTGTTTCAGCCATCTAAAGGGCAGGGTTTAACAAGTCGTGTGGTAACCTTGTGGTACCGACCACCTGAACTTCTACTGGGAGCCACAGATTATGGTGTTGCTGTGGACTTGTGGAGTGCTGGTTGCATTCTTGCAGAGTTGTTTGCTGGAAAGCCTATAATGCCTGGACGAACAGAGGTGGAGCAACTTCATAAAATCTTCAAACTCTGTGGATCACCTTCTGAAGAATACTGGAAGAAGTCGAAGCTACCACATGCAACAATTTTCAAACCTCAAAATCCCTACAAACGTGTTGTTGCTGAGACATATAAGGATTTTCCTCCTTCAGCACTAAGCCTTTTGGAAGTCCTTCTTGCTATAGAACCTGAGGATCGAGGAACTGCTTCTTTAGCACTTCAGAGCGAGTTCTTCACAACAAAGCCGCTTCCTTGTGACCCATCAACTTTGCCTAAGTACCCACCAAGTAAGGAGTTTGATGCCAAGTTTCGTCAAGAAGAAGCCAGAAGGCGAAGAGCTGCAAGTAGCAAAGGAAATGCTGAGGAACCAATTAATAAGGGTTCCAAAGAATCTAAAGCTGTTCCAGCACCAGATGCTAATGCTGAGTTGCGGGCATCAATTGAGAAGAGACAAGGGCAGTCTAACCCTAAATGCATCAGCGAGAAATACAATCCTGATGAGGATAGTGGCTCTGGCTTCCCTATTGAACCTTCTAGGACAAGAGCAGTCAATACCTTCTCGCATTCTGGCCAGTCAATGCATCCAAGTACATATGGATCTTCACGCAATATGAATTTGAACAAGGACGATGGTCATGGTGGCCCTGGACGAGGCCACAATTCAGGAAATCCTGCTGAGTTGAGAAAACAGAGATCATACATACATGGTAATGCTGCCCAACTGTCGAGATTTGCTAATTCAGTTGCTGCTGGAGGTGGTTCTAAGCTTGATATGAGTGGAGATGCTAGTGCCAATTCACAGTGGCCTGACGATTGCTTTGGTGAATCCAACCAATTGCTTAAGTCTTTACACAAGAAGGACATTTGCACAAAGGAGCCTGCCAAGGCCTATGCTCCAAAAAATGGCCACATCCACTATTCAGGACCATTGGTTCCCAGAGGGGGAAATCTCGATGATATGCTCAAGGAGCATGAAAGGCAAATCCAACAGGTTGTCCGCAAGGCACGCTCGGATAAGGTCAAGATAAGACTCATGGAGCTTCAACAAGGATCTTCCCAACACCAGATGATTATAGCTACCATTGAAGTAATTCTGCAAAGTTCTAACCAACAAACTTTAGATGTTTCAGGAAGGTGGATAGTGAGTAGAGCAAACGAAATCCTCGGCGAATTGGCCTTTAATGGTGAAACTGATTCTGCTGAAGCAGATTACACTTTATTGAAATTGTTCAATGCATGA 2307 0.443 MGCICSKGTSSNEYVAENNVKDKDTKANRTSKHLSTGEKVAIDADGSGNDATARLISNPSRDGNSGSTPISSDEGEKNGETTAKPAKQLVHMASNVGIGSGGQGQPRMTRIVSVTKGETGAQVLAGWPSWLTAVAGEAINGWIPRRADSFEKLEKIGQGTYSSVYRARDLETNKIVALKKVRFANMDPESVRFMAREIIVLRRLDHPNVMKLEGIITSRMSGSLYLVFEYMEHDLAGLSAIPGIKFTEAQIKCYMQQLLRGIEHCHSRGVLHRDIKGSNLLIDKNGNLKIGDFGLATLFQPSKGQGLTSRVVTLWYRPPELLLGATDYGVAVDLWSAGCILAELFAGKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQNPYKRVVAETYKDFPPSALSLLEVLLAIEPEDRGTASLALQSEFFTTKPLPCDPSTLPKYPPSKEFDAKFRQEEARRRRAASSKGNAEEPINKGSKESKAVPAPDANAELRASIEKRQGQSNPKCISEKYNPDEDSGSGFPIEPSRTRAVNTFSHSGQSMHPSTYGSSRNMNLNKDDGHGGPGRGHNSGNPAELRKQRSYIHGNAAQLSRFANSVAAGGGSKLDMSGDASANSQWPDDCFGESNQLLKSLHKKDICTKEPAKAYAPKNGHIHYSGPLVPRGGNLDDMLKEHERQIQQVVRKARSDKVKIRLMELQQGSSQHQMIIATIEVILQSSNQQTLDVSGRWIVSRANEILGELAFNGETDSAEADYTLLKLFNA 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2915 768 MobiDBLite consensus disorder prediction 51 76 - -
Dere02g2915 768 SMART serkin_6 150 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g2915 768 CDD STKc_CDK9_like 150 434 - -
Dere02g2915 768 Gene3D Transferase(Phosphotransferase) domain 1 238 474 - -
Dere02g2915 768 MobiDBLite consensus disorder prediction 453 484 - -
Dere02g2915 768 ProSiteProfiles Protein kinase domain profile. 150 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g2915 768 MobiDBLite consensus disorder prediction 17 39 - -
Dere02g2915 768 FunFam probable serine/threonine-protein kinase At1g54610 137 232 - -
Dere02g2915 768 MobiDBLite consensus disorder prediction 1 81 - -
Dere02g2915 768 FunFam probable serine/threonine-protein kinase At1g54610 233 474 - -
Dere02g2915 768 PANTHER CELL DIVISION PROTEIN KINASE 148 440 - -
Dere02g2915 768 MobiDBLite consensus disorder prediction 1 16 - -
Dere02g2915 768 ProSitePatterns Serine/Threonine protein kinases active-site signature. 270 282 IPR008271 GO:0004672|GO:0006468
Dere02g2915 768 Gene3D Phosphorylase Kinase; domain 1 145 237 - -
Dere02g2915 768 ProSitePatterns Protein kinases ATP-binding region signature. 156 179 IPR017441 GO:0005524
Dere02g2915 768 MobiDBLite consensus disorder prediction 534 563 - -
Dere02g2915 768 Pfam Protein kinase domain 150 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g2915 768 SUPERFAMILY Protein kinase-like (PK-like) 143 442 IPR011009 -
Dere02g2915 768 MobiDBLite consensus disorder prediction 440 581 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2915 Dere-ChrDere02 33058887 33064305 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2915 142 479 Core Cell Cycle Gene Families AT5G10270 51.124 4.92e-118 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Dere02g2915 Pkinase 2.7e-69 CL0016