Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2896 ATGCCAGGGAACAATTATAACTGCTGTCCTTCTCCTACCACACCCAGATCTAGATTAGAAAGGCTTCTGAGGGAAAGAGAGCTAAGGAAATCCAACAAGTATATTCAACCAACTGAGGGAACAAGGGATGGCAACAAAGAGCCAGAACAACTTTATAGTGATTTGTCTACAAGTGAGAATGAAAATCGTGAGGAAGAGATATTTGAAAAGATTGCAGCTGCAAGATTTTCAGATAGATTTCAGTGGAAAGAAGAGCGGCCATCCAAACAACGGTTATTGGTGGTGGCCAACAGGTTGCCTGTCTCTGCCACTAGAAAGGGGGTGGAATCATGGCAACTTGAGATCAGTGTAGGCGGGCTAGTCAGTGCAATATTAGGTGTGAAGGAGTTTGACACCAGATGGATTGGGTGGGCTGGTGTGAATGTGCCAGATGAGGTTGGCCAGAATGCATTGATTAAAGCTTTAGCTGAAAAGAGATGCATCCCAGTGTTTCTTGATGAGGAAATAGTTCATCAATACTACAATGGTTACTGCAATAACATCTTATGGCCTCTGTTTCATTACCTTGGGCTTCCTCAGGAGGACCGACTTGCTACCACTCGTAGTTTCCAATCTCAATTTGATGCATATAAGAAAGCGAACCAAATGTTTGCTGATGTGGTAAATAAGCATTATGAGGAAGGAGATGTCGTCTGGTGTCATGATTACCACCTAATGTTTCTTCCAAAATGTTTAAAAGAACATAATAAAAAAATGAAAGTTGGCTGGTTTCTCCACACACCTTTTCCTTCCTCAGAAATACATAGGACACTGCCATCCAGATCAGAACTGTTGAGATCTGTACTTGCTGCTGACTTGGTGGGATTTCATACTTATGATTATGCAAGGCATTTTGTTAGTGCTTGTACTCGTATTCTTGGACTTGAGGGTACACCTGAAGGAGTAGAAGATCATGGGAAGCTGATTCGTGTAGCTGCGTTTCCAATTGGGATTGACTCTGATCGATTTATCCGAGCCCTTGAACTCCCTCAAGTCCAGGATCACATGAAAGAACTGAAAGAAAGATTTGCAGGCCGAAAGGTAATGTTAGGTGTTGACCGTCTTGATATGATAAAAGGAATACCCCAGAAAATCTTGGCATTTGAGAAGTTCCTTGAGGAGAATCCCAATTGGCGTGATAAAGTAGTCTTGTTGCAAATTGCTGTTCCTACAAGGACTGATGTTCCTGAATATCAAAAGCTTACGAGCCAGGTGCATGAGATTGTTGGACGCATTAATGGAAGATTTGGAACGCTTACTGCTGTTCCAATACATCACCTGGATCGATCACTTGACTTTCATGCATTATGTGCACTTTATGCTGTTACTGATGTGGCACTCGTTACATCTTTAAGGGATGGAATGAACCTTGTCAGCTATGAATATGTTGCATGCCAAGCTTCTAAGAAGGGGGTTCTCATTCTAAGTGAGTTTGCAGGTGCAGCGCAGTCTCTTGGGGCTGGTGCTGTCTTGGTAAATCCATGGAATATCACAGAGGTTGCTGCCTCTATTGCTTATGCCTTAAACATGCCTGCTGATGAAAGAGAGAAGCGGCATCAGTTTAACTTCAAGCATGTGACTACTCACACATCTCAGGAGTGGGCTGCAACTTTCGTTAGTGAACTGAATGACACCATTGTTGAAGCTCAGCTTAGGACAAGACAAGTTCCACCCTTACTTCCTAATGAAGCTACAGTTGATTGTTACTCGAAATCCAATAACCGGTTAATCATACTGGGTTTCAATGCCACTTTGACTGAACCAGTGGATGCCCTCGGGAGGGGTGGTCAAATTAGAGAATTGGAGCTTAAATTGCATCCAAATTTAAAAGATCCTTTAAAGAAGTTATCTGATGATGCAAAGACAACAATAGTTGTTCTTAGTGGGAGTGATCGAGGTGTCCTGGACAAAAACTTTAGTGAATACAACATGTGGCTGGCAGCAGAAAATGGGATGTTTTTACGTCTTACTACAGGCGAATGGATGACAACCATGCCTGAAAATTTAAACATGGATTGGGTTGATAGTGTGAAGCAAGTTTTTGAGTACTTTACTGAAAGAACGCCGCGATCTCATTTTGAGCTTCGTGAGACTTCAATTGTTTGGAATTACAAGTACGCAGATGTTGAATTTGGAAGGCTTCAAGCAAGAGACCTACTGCAGCATCTTTGGACAGGCCCAATATCAAATGCATCACTAGATGTTGTCCAAGGTGGTCGATCTGTTGAGGTTCGAGCAGTTGGTGTCTCAAAGGGAGCAGCCATTGATCGGATTCTGGGAGAGATAGTTCATCACAAGGGCATGAAGGCACCAATTGATTATGTTCTCTGCGTTGGACACTTTCTGCCAAAGGATGAAGATATCTACACATTTTTTGAGCCAGAGCTTCCCTCTGAATCACCACCAGTAGCCAGAGCTATGCTATCCAACTCTTATAGGCCATCTCTGCCAAAATTCTCAGCCAGCAAAAGTGGTTCTAAGGCGGCTCGACTTAAGAAGCAACTCTCATTGTCAACTTTAGAGAAGAAAGGAATGGATTATGGAACTGGGGTTCCATGGCGGCCAGCATATCGCGACAGAATATCACTACAGGAGGGTTCTTCAGTGCTGGATCTTAAAGGTGATAATTACTTCTCTTGTGCTGTTGCACGAAAGAGATCAAGTGCACGATATCTTCTTAAAACATCAGATAATGTTGTCGACCTCTTGAAGGACCTGGCGGAACATGCATCATCACCTTCAACTTGA 2787 0.4291 MPGNNYNCCPSPTTPRSRLERLLRERELRKSNKYIQPTEGTRDGNKEPEQLYSDLSTSENENREEEIFEKIAAARFSDRFQWKEERPSKQRLLVVANRLPVSATRKGVESWQLEISVGGLVSAILGVKEFDTRWIGWAGVNVPDEVGQNALIKALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFDAYKKANQMFADVVNKHYEEGDVVWCHDYHLMFLPKCLKEHNKKMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDHGKLIRVAAFPIGIDSDRFIRALELPQVQDHMKELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPNWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEYVACQASKKGVLILSEFAGAAQSLGAGAVLVNPWNITEVAASIAYALNMPADEREKRHQFNFKHVTTHTSQEWAATFVSELNDTIVEAQLRTRQVPPLLPNEATVDCYSKSNNRLIILGFNATLTEPVDALGRGGQIRELELKLHPNLKDPLKKLSDDAKTTIVVLSGSDRGVLDKNFSEYNMWLAAENGMFLRLTTGEWMTTMPENLNMDWVDSVKQVFEYFTERTPRSHFELRETSIVWNYKYADVEFGRLQARDLLQHLWTGPISNASLDVVQGGRSVEVRAVGVSKGAAIDRILGEIVHHKGMKAPIDYVLCVGHFLPKDEDIYTFFEPELPSESPPVARAMLSNSYRPSLPKFSASKSGSKAARLKKQLSLSTLEKKGMDYGTGVPWRPAYRDRISLQEGSSVLDLKGDNYFSCAVARKRSSARYLLKTSDNVVDLLKDLAEHASSPST 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2896 928 Pfam Glycosyltransferase family 20 91 556 IPR001830 GO:0003824|GO:0005992
Dere02g2896 928 CDD GT20_TPS 91 556 IPR001830 GO:0003824|GO:0005992
Dere02g2896 928 FunFam Alpha,alpha-trehalose-phosphate synthase 614 685 - -
Dere02g2896 928 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 90 559 - -
Dere02g2896 928 Gene3D Glycogen Phosphorylase B; 338 540 - -
Dere02g2896 928 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 79 921 IPR001830 GO:0003824|GO:0005992
Dere02g2896 928 Gene3D - 680 760 - -
Dere02g2896 928 NCBIfam alpha,alpha-trehalose-phosphate synthase (UDP-forming) 91 556 IPR012766 GO:0003825|GO:0005992
Dere02g2896 928 SUPERFAMILY HAD-like 589 776 IPR036412 -
Dere02g2896 928 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 83 337 - -
Dere02g2896 928 Gene3D - 616 774 IPR023214 -
Dere02g2896 928 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 680 760 - -
Dere02g2896 928 CDD HAD_TPP 589 808 - -
Dere02g2896 928 Gene3D Glycogen Phosphorylase B; 82 337 - -
Dere02g2896 928 MobiDBLite consensus disorder prediction 26 61 - -
Dere02g2896 928 Pfam Trehalose-phosphatase 616 820 IPR003337 GO:0003824|GO:0005992
Dere02g2896 928 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1-like 338 540 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2896 Dere-ChrDere02 32505509 32519831 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2896 1 926 Trehalose Biosynthesis Gene Families AT1G78580 74.922 0.0 1422