Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2895 ATGTTGTTATTGCCAATGGGAAAGAATGAGTTTCTCACGCCAAAGGCAATTGCTAATCGAATCAAAGCAAAGGGGCTGCAGAAGCTTCGATGGTATTGCCAGATGTGCCAGAAGCAATGCCGAGATGAAAATGGGTTCAAGTGTCATTGCATGAGTGAAGGTCACCAGCGTCAAATGCAAATCTTTGGACAAAACCCGCATAGGATAGTTGAGGGCTACTCTGAAGAGTTTGAGAGGACATTTCTTGACCACATGAAGCGCAGTCACCGATTCAGTCGTATAGCAGCTACAGTAGTTTACAATGAGTACATTAGTGATAGGCACCACATTCATATGAATTCCACCCAGTGGCTTACGCTAACTGAGTTTGTCAAGTATTTGGGTCGGACTGGCAAGTGTAAGGTTGAAGAAACACCTAAGGGTTGGTTTATCACGTACATTGATAGAGACTCTGAGACTCTTTTCAAAGAGCGGATGAAGAATAAGAGACTAAAGGCAGACATGGTTGAAGAAGAGAAGCAAGAGAAGGAGATAAGGAAACAGATTGAAATAGCAGAGCAGTTGATGCAGCCATCTATCAGTGGATCTGATCAGCCTTTACAGGCTGAGCTTCCTAGAGAATTTAAAGTGGAAGATGGAGCTAAGATTGGATTTTCTCTTGGCTCATCATCAAAGCCTTCAAACATGGAAAAACACGAGGGACCAAAGGTAGTGTTTGATGAGGTTGAGGATGCTAGAAATGAAGAAAGGAACCTTGGAGGGTCTTTGAAAAGGAAAGAGATTGGTGGAAAATCAACATTGGATGAATTGATGAGGGAGGAGGAGAAGAAAAAGGAGAAAATTAATAGGAAGGATTACTGGTTGTACGTGGGCATTGTTGTTAAGGTCATGAGCAAAGCTTTGGCTGATAAAGGGTATTACAAACAGAAAGGTGTTGTGTTAAAAGTGATTGACAAATATGTTGGGGAAATAGAAATGCTTGAAAGCAAGCATGTGCTCAGAGTTGACCAGGCAGAGCTTGAAACTGTGATTCCCCAAATTGGGGGTATTGTGAAAATAGTAAACGGTGCGTATCGCGGATCAACAGCAAGATTGTTAGAGGTTGATACGGATCGCTTTTGTGCCAAGGTGCAGATAGAGAAAGGTCCCTATGATGGGAGAGTACTCAAGGCTTTGGAATACGAGGATATTTGTAAAGTAGCTCACCAACACATGAGAAACCCAAATGGAAGTCTCAGTAAAGAGCGAAAAGAGGACAAACCTTCGATTCCGTTTATAGCATTGGGTAGACAAATGATGCCGGTCTTTGATTGTCTTCGTCGGCGAACATTGCAGCGGCGCCCGCTTCTCATCTCACACTACCATGGCTTAGATGGGCTCAGTGGCAGAGCCAGCAGAGTGCTTGATTTAGACAGGCTGAAAGATAAGGATCTAGGTACTTGTCTATTGGTCCAAATCCATGGTATTCCTAAAAATGGAATGGGTGAGAGGAATTTTGTGAAGCTTGGAGGAAGACTAGGGATTGTCTTAGCCTATGAAGAACCTTTTGCACATAAAGGGATGGAAAAGGTCTTTGTAACTTTCAAGTATGAGAAACTACAACATTATTGCTACAATTGCTACTTTACTGGACATGATGCTAAATTTGGTTCAAATGCTATTTATTTGCATGATAGAGCTAATCGCATCCATGGGAATACAGGAGTTTATGATTGTGGGTTTCAATACGATAAGGAAGGTGGGCCGAAATTCATTATTAGGGTTTATGTTCTCTACACTAAAGAAGATGATGGCCTAATTAAGGGAGTTGATGTAGGAGATAAAGGTGTACAATGTAGTAAAGAGAAGGTCCATGATGAAACACGAATAGAGCCCTATATTATGGAATTACCCCTAAATGACGAGTGGAAGGATGACGAGAAAGCCATTATTTACAATAGTGTTATAGAAAGGATTGCTAAGGGCTCTCTTTATGGTGGCTTAGAGAAAGCTTTTTGCTTCAACTTCGGTATTGCATCTAGAATCAGTATCTACTCCGTGCCTCACTCTTGCCACCGTATTCGCCGGCGCAGCAAGATCCGCCGCTCGAACGATCTGAAAATCTCCTCACATCTGCGTCAATCTCAACCTAAAAGTCTCCCACAAGCCCAATCCATGTCCAAAACCGTTCGATCAACCCCGACCATTCTCTTCTTCGTCATCCTTCTACTCACACTAGCACCAACACCATCCCAATCCTTCTCTACGTACTTCCAGTACCGAAACCTCATCTCCCTGGCCCACTCGCTAATGACCGGCGTCGCCAACCTCCGCGCCGCTCGCGGCGACATCTCCGGCTCCGAGAGAGCCCGTGCCATCGCGGACAAGCTGGAGGGCGGGCTCGGCTTAGGGTTCTGGAGGCTCGCTTGGTCGGCTGGGTGGGACTATGTCACGAACTTCGCGTGGAGGGACTTGCCTATGACGGAGCTATACGGCGCCGTTTCAGACATGAACGAGTTGCTGAGGGGTTTGAGTGAGTTGACTCGCATAGAATCGGATGCGGCGAAAGCAGCGTGGGTTGGGCGAAATTACCAAAATGTACTGAGCATCTCCAAGTCGCTCTCTAGGAAGCTTGTAAAAGCATTTGGCAAATCGGGAGTAGTGAGGGAAGTGGTGGAGACAGTGCAGAAGGAGGTGGTGGAGGGTGGCTTACTCAGAGATTGCCTTGAATTGGGAAGCAATGATTTGAAAGGCTTCATCCTCCTTCTCAAGGACTTGGCCTTGAGATTCTACTCTGTTTCTGACAGAGACTCTGATTTATAA 2802 0.4504 MLLLPMGKNEFLTPKAIANRIKAKGLQKLRWYCQMCQKQCRDENGFKCHCMSEGHQRQMQIFGQNPHRIVEGYSEEFERTFLDHMKRSHRFSRIAATVVYNEYISDRHHIHMNSTQWLTLTEFVKYLGRTGKCKVEETPKGWFITYIDRDSETLFKERMKNKRLKADMVEEEKQEKEIRKQIEIAEQLMQPSISGSDQPLQAELPREFKVEDGAKIGFSLGSSSKPSNMEKHEGPKVVFDEVEDARNEERNLGGSLKRKEIGGKSTLDELMREEEKKKEKINRKDYWLYVGIVVKVMSKALADKGYYKQKGVVLKVIDKYVGEIEMLESKHVLRVDQAELETVIPQIGGIVKIVNGAYRGSTARLLEVDTDRFCAKVQIEKGPYDGRVLKALEYEDICKVAHQHMRNPNGSLSKERKEDKPSIPFIALGRQMMPVFDCLRRRTLQRRPLLISHYHGLDGLSGRASRVLDLDRLKDKDLGTCLLVQIHGIPKNGMGERNFVKLGGRLGIVLAYEEPFAHKGMEKVFVTFKYEKLQHYCYNCYFTGHDAKFGSNAIYLHDRANRIHGNTGVYDCGFQYDKEGGPKFIIRVYVLYTKEDDGLIKGVDVGDKGVQCSKEKVHDETRIEPYIMELPLNDEWKDDEKAIIYNSVIERIAKGSLYGGLEKAFCFNFGIASRISIYSVPHSCHRIRRRSKIRRSNDLKISSHLRQSQPKSLPQAQSMSKTVRSTPTILFFVILLLTLAPTPSQSFSTYFQYRNLISLAHSLMTGVANLRAARGDISGSERARAIADKLEGGLGLGFWRLAWSAGWDYVTNFAWRDLPMTELYGAVSDMNELLRGLSELTRIESDAAKAAWVGRNYQNVLSISKSLSRKLVKAFGKSGVVREVVETVQKEVVEGGLLRDCLELGSNDLKGFILLLKDLALRFYSVSDRDSDL 933
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2895 933 Gene3D - 345 401 IPR014722 -
Dere02g2895 933 FunFam DNA/RNA-binding protein kin17-like 291 344 - -
Dere02g2895 933 PANTHER KIN17 KIN, ANTIGENIC DETERMINANT OF RECA PROTEIN HOMOLOG 6 401 IPR037321 -
Dere02g2895 933 CDD KOW_KIN17 347 400 IPR041995 -
Dere02g2895 933 Pfam Zinc knuckle 519 549 IPR025836 -
Dere02g2895 933 Gene3D - 65 165 IPR038254 -
Dere02g2895 933 Pfam KN17 SH3-like C-terminal domain 283 336 IPR041330 -
Dere02g2895 933 Gene3D - 291 344 - -
Dere02g2895 933 FunFam DNA/RNA-binding protein KIN17, putative 66 165 - -
Dere02g2895 933 Coils Coil 264 284 - -
Dere02g2895 933 SMART kow_9 344 371 IPR005824 -
Dere02g2895 933 Coils Coil 159 188 - -
Dere02g2895 933 SMART Kin17_mid_2 57 183 IPR019447 -
Dere02g2895 933 FunFam DNA/RNA-binding protein KIN17, putative 345 401 - -
Dere02g2895 933 SUPERFAMILY beta-beta-alpha zinc fingers 31 71 IPR036236 -
Dere02g2895 933 Pfam Domain of Kin17 curved DNA-binding protein 57 182 IPR019447 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dere02g2895 Dere-ChrDere02 32481809 32499020 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2895 6 401 C2H2 Transcription Factor Family AT1G55460 71.046 0.0 578