Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2889 ATGGAATCGAAAAACCCAGCAAGGTTTAAATTGGGTAAGCAGTCATCGCTGGCCCCAGAACGCCATGATGAAGAATCAGAGCTCCATAGTGAGGATGATGGCATGGGGGATATTGATCCAGGAGTGAGGCTAATGTATTTGGCCAACGAAGGCGATCTGGATGGTATTCGTGAGTTATTGGATACAGGGGTTAGTGTGAATTTCAGAGATATTGATAATCGCACGGCTCTTCATGTTGCGGCGTGTCAGGGATTGACTGATGTGGTTGCTTTGTTGCTCGAAAAAGGAGCTGAGGTTGACCCAAAAGATCGCTGGGGGAGCACGCCTCTCGGAGATGCTATATATTATAAAAACAGTGATGTGATCAAATTATTGGAGAAGCATGGAGCAAAGCCTCTGATGGCCCCTATGCATGTTAACCATGCACGAGAAGTCCCAGAGTATGAAATCTATCCCAGGGAACTTGATTTTACCAACAGTGTGGAGATAACTAAGGGAACTTTCTGTAGTGCATTGTGGCGTGGAACAGAGGTTGCTGTAAAGAAGCTTGGGGATGATGTCATTACCCATGAGGATAAAGTGAAGGCATTCAGTGATGAGCTTGCATTGTTTCAGAAGATTCGGCACCCTAATGTAGTCCAGTTTCTGGGTGCTGTGACTCAGAGCAGTCCGATGATGATTGTGACTGAATATCTTCCCAAGGGAGATCTCCGTGCATTCTTGAAAAGGAAAGGAGCTCTGAGACCAACAACAGCTGTGAGATTTGCTCTTGATATTGCTAGGGGAATGAGTTATTTGCATGAAAATAAGCCATCACCAATAATTCACCGTGATCTTGAGCCCTCTAATATATTACGGGATGATTCGGGCCACCTAAAAGTTGCAGACTTTGGGGTCAGCAAATTGCTGGCAGTTAAAGAAGACAGGCCCCTAACTTGCCAAGATACTTCTTGCCGCTATGTGGCTCCAGAGGTTTTTAAACAAGAAGAGTATGACACCAAAGTGGATGTTTTCTCATTTGCTTTAATTCTGCAAGAGATGATAGAGGGCTGCCCGCCATTTCATGCAAAGCAAGAAAATGAGGTTCCTAAGGCATATGCTGGGAAAGAACGGCCACCATTCAGAGCTCCTCCCAAGCGTTATGCCCATGGACTGAGAGAATTGATTGAAGAATGTTGGAATGAGAATCCAGCAAAGAGGCCATCATTTAGGCAAATAATAACAAGGCTTGAATCCATGTACAACACTCTTGCTCATAAAAGACGTTGGAAGGTTAGGCCACTGAAATGCTTTCAGAATCTGGAAGCCATGTTGAAGAGAGATCACTCAAATCTAAGCAGTCAGGGCGGTTCATCTCGTTCAACAGCCAGCAGTATATGA 1380 0.4486 MESKNPARFKLGKQSSLAPERHDEESELHSEDDGMGDIDPGVRLMYLANEGDLDGIRELLDTGVSVNFRDIDNRTALHVAACQGLTDVVALLLEKGAEVDPKDRWGSTPLGDAIYYKNSDVIKLLEKHGAKPLMAPMHVNHAREVPEYEIYPRELDFTNSVEITKGTFCSALWRGTEVAVKKLGDDVITHEDKVKAFSDELALFQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALRPTTAVRFALDIARGMSYLHENKPSPIIHRDLEPSNILRDDSGHLKVADFGVSKLLAVKEDRPLTCQDTSCRYVAPEVFKQEEYDTKVDVFSFALILQEMIEGCPPFHAKQENEVPKAYAGKERPPFRAPPKRYAHGLRELIEECWNENPAKRPSFRQIITRLESMYNTLAHKRRWKVRPLKCFQNLEAMLKRDHSNLSSQGGSSRSTASSI 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2889 459 Gene3D - 9 147 IPR036770 -
Dere02g2889 459 ProSiteProfiles Ankyrin repeat region circular profile. 72 104 - -
Dere02g2889 459 SUPERFAMILY Ankyrin repeat 43 134 IPR036770 -
Dere02g2889 459 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 163 413 - -
Dere02g2889 459 SMART ANK_2a 39 68 IPR002110 GO:0005515
Dere02g2889 459 SMART ANK_2a 72 101 IPR002110 GO:0005515
Dere02g2889 459 SMART ANK_2a 105 134 IPR002110 GO:0005515
Dere02g2889 459 SUPERFAMILY Protein kinase-like (PK-like) 156 411 IPR011009 -
Dere02g2889 459 Gene3D Phosphorylase Kinase; domain 1 153 232 - -
Dere02g2889 459 ProSiteProfiles Protein kinase domain profile. 122 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g2889 459 FunFam Os01g0748600 protein 143 430 - -
Dere02g2889 459 ProSiteProfiles Ankyrin repeat profile. 72 104 IPR002110 GO:0005515
Dere02g2889 459 Pfam Protein tyrosine and serine/threonine kinase 173 410 IPR001245 GO:0004672|GO:0006468
Dere02g2889 459 CDD STKc_MAP3K-like 163 410 - -
Dere02g2889 459 MobiDBLite consensus disorder prediction 15 35 - -
Dere02g2889 459 FunFam Integrin-linked protein kinase family 22 148 - -
Dere02g2889 459 Gene3D Transferase(Phosphotransferase) domain 1 233 455 - -
Dere02g2889 459 FunFam serine/threonine-protein kinase STY46-like 150 233 - -
Dere02g2889 459 PIRSF ILK 1 433 - -
Dere02g2889 459 Pfam Ankyrin repeats (3 copies) 44 132 IPR002110 GO:0005515
Dere02g2889 459 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2889 Dere-ChrDere02 32420922 32426790 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2889 8 431 MAP Kinase Kinase Kinase AT4G18950 71.194 0.0 630
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Dere02g2889 PK_Tyr_Ser-Thr 1.6e-55 CL0016