Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2884 ATGCAGGCTCTCAACATCTTTGCGCTCTTACTTGTGGTACTTACTTGTTTCGGGATACTGGGAATTTCTCATGAGGCAAGTTTACCCCAAGAAGAAGTTGATGCTCTTCAAGAAATTACCAAAACGATGGGTGCAACCTATTGGAAATTTAATGCTTCCTGTGGAATTGATACGGTTGGAGAAACACCAGAACCACCTCCAGAATCAGAGAGAAGAGTATCTTGTGACTGCAGTTTTGAAAACTACACAGTCTGTCATGTTGTAAAGATGACCCTCAAGCGGCTTAGCCTCCCTGGCATGCTCCCGCCTCACCTGGTCAAGCTACCCTATCTTCAAGAAATAGATTTTGCTTACAATCGCTTCAATGGTACTATTCCAGAGGAATGGGCTTCAATGAACCTAACTTCAATCTCTCTTCTTGTGAACCGCTTATCAGGGGAAATTCCTAAGTATCTAGGAAATATTATGACTCTCACATACCTGATGCTTGAAGCAAACCAATTTTCTGGTGTCGTTCCTCCTGAGCTTGGGAGTCTAATCAACTTGCAGACATTGGTACTGTCGTCTAATCAGTTGACTGGGAGCTTACCAGTGACACTTGCTGGATTACAATATCTGACTGACTTTAGGGTAAATAATAACAACTTCACTGGAACCATACCTAATTTCATTCAAAACTGGAAGCTTCTCCAAAGACTTTCTTATGGGTTAAGAGAAATGCATGCAAGTGGACTAGAGGGACCAATTCCATCAAATGTATCACTTTTGAATAACTTAGTTCAGTTGAGAATCAGTGACATAATCAGTCCTAGTCAGGTTTTTCCTTCTTTGGAAAACATGCCAAACATGACAACATTGGTTTTGAGGAACTGTAACCTTATTGGGCGGATACCTTTCTACATCTGGACAATAACGAATTTGCAAACTTTGGATGTCAGTTTTAACAAACTAGTTGGGGAAATTCCAGCAGCTATAAGTCTTAGACGTCTAAGATTTATTTACCTTACAGGAAATATGCTCAGTGGAAACGTACCAGCTTCAATCTTGATGGGTGGAAGTAGCATTGATCTTTCTTACAACAACTTTACTTGGCAAGGCCCTGAGCAACCTGCTTGTCAGAATGACATGAACTTAAATCTGAATTTGTTCAGAAGCTTTAAGAAGAAGAACAAGTTAGAAGAATTTGTTCCTTGCTTAGAGAATTTCAGTTGTCAACAGTATTCAACATGTTTACACATAAATAGTGGTGGAGAGGATGTAAAAGTAACAGAAAATAAGGGAGAAAACCTTTACATTGGGGATGGAAATGTTAATGGTGGTACAGCGACATATAACTATAGCAACAATGATAATTGGGGCTTCTGTAGTACTGGAGACTTCATGGATGATTTTGACGCCCAGAACATACGTTACACCCTTTCTCTGCCATCTTCAAATATGCCTGAACTATATACAACAGCACGTATATCTCCACTTTCACTTACTTATTTCCATAATTGCATGGAAAATGGGAACTACACTGTAAATCTCCACTTTGCTGAAATACAGTTCACAAACGATGATACATATAGAAGTCTTGGGAAGCGCATATTTGATATCTATGTACAGGAGCAACTATTTTGGAAGGATTTTGATATTGAGAGTGAGACAAAAGTTGCCCAAAAACCACGGGTTGTGCCAATATATAATGTCAGTGTCACAAATAATATCTTGGAGATTCGGTTCCATTGGGCCGGAAAAGGAACAACTAGAATTCCTGATATAGGAGCTTATGGTCCCATTGTATCGGCATTGTCTGTGGTTTCTGATTCCAGACCTTGCTCAAATGGGGGAAGGAAGGGTGCAGTTAATAAGATCATTGGAATTGGAGCTGCTGCTCTATGCTTAGTGCTTTTTACGGCAGGAATTATTTGGTGGAAAGGCTGTTTCAGAAGAAAACTCCAAAAGAAAAAAGATTTTCAGACTGGAACTTTTAGCTTCAAGCAGATGGGAGCTGCCACTAACAACTTCTCCTACTCTAATAAAATTGGGGAAGGCGGTTTTGGTCCGGTATACAAGGGGCAATTACCAGATGGTACTACTGTAGCAGTTAAGCAACTATCATCAATGTCACGGCAAGGAAATCGTGAATTTCTAAATGAAATTGGCCTAATATCTTGTTTGCAACATCCTAACCTTGTGAAACTCTATGGATCTTGCATTGAAGGGGATCAACTACTATTGGTATATGAATACATGGAAAATAACAACCTTGCCCGTGCTTTATTCGGCACTGAAAACAATCAGCTTAAACTGGATTGGCCCACAAGACTTAGGATCTGCATTGGCATAGCAAAAGGTCTAGCATTTCTCCATGAAGAGTCAAGACTCAAGATTGTGCACAGAGATATCAAGGCTACTAATGTGTTACTTGATGGAAATTTAAACCCTAAAATATCAGACTTTGGTTTGGCCAAGCTCAATGAAGAAGAGAAGACTCACATCAGCACTCGAATTGCTGGGACTATAGGATATATGGCACCAGAATATGCATTATGGGGCCATTTGACATACAAAGCAGATGTTTACAGTTTTGGAGTTGTGGCATTAGAAATTGTTACCGGAAAGAGCAACAACAATTATGTGCCTAGTGATGGCTCTGTTTGTCTTCTGGATTGGGCATGTCAATTGCAACAAACTGGAACGTTGATGGAGCTGGTTGATGAAAGGATGGGGTCAATGGTTAATGAAAGGGAAGCAGAAATAGTGATCAAAGTAGCTCTTCTCTGCACAAATGCATCTCCATCACTTAGGCCCACAATGTCTGAGGTTGTAAATATGCTTGAAGGACAAATGGATATTCCAGATGTAATCCCAGAACCAAGTACTTACAATGATGATTTGAGGTTCAAAGCCTTGAGGGACCTTGGTCAATGGTCAAAACAGAGTTTGAGGGGAAGCCAGACCCAATCTTCAGTGTCGGTCCATACCTTCAGCCTAGAATCTGGCACTACTTCCACAGGTTATTCTGTGGATCATAAGTCAGTCAGCGACAGGGAAATTTCAAATTTAAAGGAAACACTCTGA 3066 0.4028 MQALNIFALLLVVLTCFGILGISHEASLPQEEVDALQEITKTMGATYWKFNASCGIDTVGETPEPPPESERRVSCDCSFENYTVCHVVKMTLKRLSLPGMLPPHLVKLPYLQEIDFAYNRFNGTIPEEWASMNLTSISLLVNRLSGEIPKYLGNIMTLTYLMLEANQFSGVVPPELGSLINLQTLVLSSNQLTGSLPVTLAGLQYLTDFRVNNNNFTGTIPNFIQNWKLLQRLSYGLREMHASGLEGPIPSNVSLLNNLVQLRISDIISPSQVFPSLENMPNMTTLVLRNCNLIGRIPFYIWTITNLQTLDVSFNKLVGEIPAAISLRRLRFIYLTGNMLSGNVPASILMGGSSIDLSYNNFTWQGPEQPACQNDMNLNLNLFRSFKKKNKLEEFVPCLENFSCQQYSTCLHINSGGEDVKVTENKGENLYIGDGNVNGGTATYNYSNNDNWGFCSTGDFMDDFDAQNIRYTLSLPSSNMPELYTTARISPLSLTYFHNCMENGNYTVNLHFAEIQFTNDDTYRSLGKRIFDIYVQEQLFWKDFDIESETKVAQKPRVVPIYNVSVTNNILEIRFHWAGKGTTRIPDIGAYGPIVSALSVVSDSRPCSNGGRKGAVNKIIGIGAAALCLVLFTAGIIWWKGCFRRKLQKKKDFQTGTFSFKQMGAATNNFSYSNKIGEGGFGPVYKGQLPDGTTVAVKQLSSMSRQGNREFLNEIGLISCLQHPNLVKLYGSCIEGDQLLLVYEYMENNNLARALFGTENNQLKLDWPTRLRICIGIAKGLAFLHEESRLKIVHRDIKATNVLLDGNLNPKISDFGLAKLNEEEKTHISTRIAGTIGYMAPEYALWGHLTYKADVYSFGVVALEIVTGKSNNNYVPSDGSVCLLDWACQLQQTGTLMELVDERMGSMVNEREAEIVIKVALLCTNASPSLRPTMSEVVNMLEGQMDIPDVIPEPSTYNDDLRFKALRDLGQWSKQSLRGSQTQSSVSVHTFSLESGTTSTGYSVDHKSVSDREISNLKETL 1021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2884 1021 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 270 391 - -
Dere02g2884 1021 Gene3D Ribonuclease Inhibitor 269 393 IPR032675 -
Dere02g2884 1021 MobiDBLite consensus disorder prediction 996 1021 - -
Dere02g2884 1021 CDD STKc_IRAK 676 943 - -
Dere02g2884 1021 MobiDBLite consensus disorder prediction 1006 1021 - -
Dere02g2884 1021 Pfam Malectin domain 410 598 IPR021720 -
Dere02g2884 1021 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 197 268 - -
Dere02g2884 1021 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 408 603 - -
Dere02g2884 1021 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 11 979 - -
Dere02g2884 1021 SUPERFAMILY L domain-like 77 381 - -
Dere02g2884 1021 Gene3D Transferase(Phosphotransferase) domain 1 746 949 - -
Dere02g2884 1021 ProSitePatterns Serine/Threonine protein kinases active-site signature. 792 804 IPR008271 GO:0004672|GO:0006468
Dere02g2884 1021 Pfam Protein tyrosine and serine/threonine kinase 672 941 IPR001245 GO:0004672|GO:0006468
Dere02g2884 1021 SUPERFAMILY Protein kinase-like (PK-like) 654 957 IPR011009 -
Dere02g2884 1021 SMART serkin_6 670 941 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g2884 1021 FunFam Putative LRR receptor-like serine/threonine-protein kinase 746 953 - -
Dere02g2884 1021 Gene3D Phosphorylase Kinase; domain 1 640 745 - -
Dere02g2884 1021 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 641 745 - -
Dere02g2884 1021 Gene3D - 406 605 - -
Dere02g2884 1021 Gene3D Ribonuclease Inhibitor 32 197 IPR032675 -
Dere02g2884 1021 ProSiteProfiles Protein kinase domain profile. 670 947 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g2884 1021 Gene3D Ribonuclease Inhibitor 198 268 IPR032675 -
Dere02g2884 1021 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 34 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2884 Dere-ChrDere02 32331810 32353676 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2884 4 836 Receptor kinase-like Gene Family AT1G29750 58.760 0.0 1004
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dere02g2884 PK_Tyr_Ser-Thr 1.2e-49 CL0016