Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2835 ATGGCCGACGTTGTTTCCACCAAGCCCTCCACTAGCAGCAACAACAAGAAGGTGAGCGGGAATAGCCAGTTACTGGGTCGCTTTGAAATCGGGAAGCTCCTCGGTCATGGAACTTTCGCGAAAGTCTACCATGCCCGCAACATCAAAACCGGTGAAGGGGTCGCCATCAAGGTCATAGACAAGGAGAAAATCCTAAAGGGTGGCCTCGTCGCTCACATCAAGCGCGAGATCTCCATTCTCCGACGCGTGCGGCACCCCAACATCGTTCAACTGTTCGAGGTAATGGCTACAAAGACCAAGATCTATTTTGTGATGGAATATGTTCGTGGGGGTGAGCTATTCAATAAGGTCGCCAAAGGGCGATTGAAAGAGGAGGTTGCGAGAAAATACTTTCAGCAATTGATTTCCGCTGTTGGCTTCTGCCATGCCAGAGGTGTGTTTCATAGGGATCTCAAGCCTGAAAACTTGTTACTCGATGAAAATGGTAATCTCAAGGTGTCTGATTTTGGACTGAGTGCTGTATCTGATCAAATAAGGCAAGATGGGTTGTTCCACACATTTTGTGGGACTCCTGCGTATGTTGCCCCTGAGGTATTGGCTAGGAAAGGGTACGATGGGGCAAAGGTTGATCTTTGGTCTTGTGGAGTTGTTCTGTTTGTTTTGATGGCAGGGTACTTGCCTTTCCATGACCAGAATATCATGGCAATGTATAAGAAGATTTACAGGGGTGAGTTCCGATGTCCTAAGTGGTTTTCACCGGAGCTCGCTCGGCTTCTATCGCGTCTTCTTAATACCAACCCACAAACCCGGATTTCCGTTCCCGAGATTATGGAGAACAGGTGGTTCAAGAAAGGGTTTAAACAGATAAAGTTCTATGTGGAGGATGATAGACTTTGTAATGTTGATGATAAGCTAGATAAGGAAGATGATATGGAATCAACTTCGGATCACTTAATAATATCAGAATCTGACTCCGAGTTAGAGACTAGGAGGAGGAATGCTTCATTGCCAAGACCTGCGAGCTTGAATGCTTTTGATATAATATCATTTTCTCCAGGTTTTGATCTTTCTGGGTTGTTTGAGGAGAAGGGAGATGAGGCGAGGTTTGTGTCAGGCGCACCTGTGTCAAAGATCATATCAAAATTGGAGGAGATTGCTAGATTGGTCAGCTTCACTGTGAGGAAGAAAGATTGCAGAGTGAGCTTGGAGGGTTCAAGAGAAGGTGTGAAGGGGCCATTGACCATTGCCGCAGAGGTATTTGAATTAACACCGTCTTTGGTGGTGTTGGAGGTGAAGAAAAAAGGAGGAGATAAAGCAGAGTATGAGCAATTTTGTAACGCTGAATTGAGACCGGGGTTGCAGAATTTGATGACAGAGGAATCTGCTACTTCTTCCCAAATACCTACAGCTTCTGAACCGTCGCAACTACCTATGGATATTGAATCTCCACATTACATACCTTCAGATACCGAATAA 1476 0.4553 MADVVSTKPSTSSNNKKVSGNSQLLGRFEIGKLLGHGTFAKVYHARNIKTGEGVAIKVIDKEKILKGGLVAHIKREISILRRVRHPNIVQLFEVMATKTKIYFVMEYVRGGELFNKVAKGRLKEEVARKYFQQLISAVGFCHARGVFHRDLKPENLLLDENGNLKVSDFGLSAVSDQIRQDGLFHTFCGTPAYVAPEVLARKGYDGAKVDLWSCGVVLFVLMAGYLPFHDQNIMAMYKKIYRGEFRCPKWFSPELARLLSRLLNTNPQTRISVPEIMENRWFKKGFKQIKFYVEDDRLCNVDDKLDKEDDMESTSDHLIISESDSELETRRRNASLPRPASLNAFDIISFSPGFDLSGLFEEKGDEARFVSGAPVSKIISKLEEIARLVSFTVRKKDCRVSLEGSREGVKGPLTIAAEVFELTPSLVVLEVKKKGGDKAEYEQFCNAELRPGLQNLMTEESATSSQIPTASEPSQLPMDIESPHYIPSDTE 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2835 491 CDD STKc_SnRK3 27 281 - -
Dere02g2835 491 ProSitePatterns Serine/Threonine protein kinases active-site signature. 146 158 IPR008271 GO:0004672|GO:0006468
Dere02g2835 491 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 21 453 - -
Dere02g2835 491 MobiDBLite consensus disorder prediction 458 476 - -
Dere02g2835 491 MobiDBLite consensus disorder prediction 458 491 - -
Dere02g2835 491 FunFam Non-specific serine/threonine protein kinase 339 457 - -
Dere02g2835 491 Pfam Protein kinase domain 28 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g2835 491 SMART serkin_6 28 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g2835 491 SUPERFAMILY Protein kinase-like (PK-like) 24 283 IPR011009 -
Dere02g2835 491 ProSitePatterns Protein kinases ATP-binding region signature. 34 57 IPR017441 GO:0005524
Dere02g2835 491 FunFam Non-specific serine/threonine protein kinase 18 321 - -
Dere02g2835 491 Pfam NAF domain 339 395 IPR004041 GO:0007165
Dere02g2835 491 Gene3D Kinase associated domain 1, KA1 339 459 - -
Dere02g2835 491 CDD CIPK_C 343 454 - -
Dere02g2835 491 ProSiteProfiles NAF domain profile. 337 361 IPR018451 GO:0007165
Dere02g2835 491 ProSiteProfiles Protein kinase domain profile. 28 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g2835 491 Gene3D Transferase(Phosphotransferase) domain 1 19 337 - -
Dere02g2835 491 FunFam Non-specific serine/threonine protein kinase 19 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2835 Dere-ChrDere02 31939788 31941263 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2835 11 491 CBL-interacting serine-threonine protein kinases AT4G18700 78.189 0.0 770
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Dere02g2835 Pkinase 9e-75 CL0016