Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2832 ATGAGGGTCGCACGCGCGCGCGCGAAATGTGGACCCCGGTCAACCGTTTCAGTCACAACAAAAGCGCGTCCGACTCTCCGACTTCTTCGGAGGTGGGCCCATCTCCACCTCTCTTCTTCGGATCCCTCTCGCCTCACCGCCGATTTCCCATTCAACGACCGCCGATCAAAGCCTTCCCGTGGGCCCCGCCTTACTCTATCACTCCTTCCCAGTTTGCTTGGTATTGAGGCTATTCCTTCTTTCTTCTTCGTTACGATTTTGACTCAACCACTGTGGCATTGGCTTTATAAAGGAATGGGGTTAAGATTTAACCCATATGGATGTTGGAGCAACATATATGCTGCTTTAATTTGTCTGTGGAGTATTCGTGTGTGTTGGTCGCATAATGACGAAGTAATGTCTTTGTTGGAGTTCCGGGCCAGAATAGCTTCTGATCCTCATGATGCTTTGTCTAACTGGAAACCAACTGATCGTGATCCTTGTGAGTGGTTGGGTATTCAATGTGTAGACAGCAAAGTGAAAATGCTGAACCTAAGTGGGCTATCTTTGGAAGGGACACTGGCTCCTGAGCTTGGGAAACTCACACACTTAAAATCTCTTGTATTATGCAAGAATAATTTTTCTGGTACGATTCCAAGAGAGCTCGGAGACCTAACTAAACTTGAATTGTTGGATTTAAGAGACAATAACTTGAGTGGAAGTATTCCTGCAGAAATTGGCAGGAAGTTGTTCCTAAAAGACTTGTTTCTTTTTGGCAACAACATTGAATCCAATGTTCCTCAAGATATTGGGAAGCTCAAATTACTTGGTAAATCGAAATTTGTTGACAATGGTACATCTCATCTGACAGCTGAAGTTGGCTGCATGAATAGAAAGTTGGGTCACTGTGCGTGGCAGAGCAACTTAAAACAATGGAACATGGAAGAGTTGCTTGTCATTCCAATTAAAGGAGCAATTACGAAATACCTCAGTGCCTTGACGCTGCCACTGTTCAAGCTACAGAATGATCATGGCTATGAGGAGAGTTGCTTTGACAATCTTCCGAATGAGTCAGCACTTGCTCAGAATTTACTTGTCAATTTTGAACGCCGTAAATTACTTGATGACTCTAGTAACCTCCCAGCCGCACCCATTAGTGTCGGGCCTACCAAACAGATCATTAGTCTCCCCACTACCTTGAGTAGTGGAGCCTTCCCAGCTGTTTCAAATGCCTATAAGAATCAAAATCAGTCACATACACCACTGCCTTCACCTGCACCACTGCCCTCGCCTGCTTCTTCTGGACACGAAACAAATCAGCAACCCTCTGCTAATGAAGAGGCTTCTGGAAAGACTTGGAAGTACATAATCATTATATCAGGCGTGCTTGTGTTGGTCATTGTTGTTGTTGCCATATGTTGCCTGTGGAATAAACGAGCAGTAAAAGCAATTAGGCCGTGGAAGACAGGATTAAGTGGACAGTTACAGAAAGCTTTTATTACAGGGGTCCCTAAGTTGAATAGAGCAGAGCTGGAAATAGCATGTGAGGATTTCAGCAATATCATTACGACCACTCCTCATTGCACCACATACAAGGGAACACTGTCCAGTGGAGTCGAGATTGCTGTGATATCAACTCTTGTTACTTCCGCACAAGACTGGTCAAAGAACATGGAGAAGGGCTATCGGAAGAAGATTGATACTTTGTCTCGTATAAACCATAAAAACTTTATCAATCTTATTGGCTACTGTGAGGAAGAAGAGCCATTCACTAGGATGTTGGTGGTTGAGTATGCTCCGAACGGAACCCTATTTGAGCATTTGCATGTTGAGGGACTTGAACATCTTGATTGGAATGCGAGGGTGAGGGTTATTATGGGCGTGGCTTATTGTCTTCAGTACATGCACCATGATTTGAATCCACCAGTAGCTCATTCCAACCTCGATTCACGTTCAATCTTATTAACGGATGATTTTGCTGCAAAGATTCTAGAGGACACTTTTAGCTCGTCAACTGAAGATAAATCAGTTTCAAAGAATTCTGAATTGCCACCGAATGCTGATCCTGAAACAAATGTCTATTCCTTTGGAAAATTGTTATTTGAAATCATTTCTGGGAAACTACCTGACTCTGAAGAACAAGGCCAACTTGAGAAATTGGCTGGTAAATTTTCAAATGGTAAGAGAAGCATCAGCTATATGATCGATCCCTCCCTTCAGTCCTTCAAAGAGAAAGAACTTGATGTGATCTGTGATGTGATCCAAGAATGCGTCCAACCTAATCCTAGGTTGAGACCCACAATGAAGGACTTAATTTCGAAATTGAGAGAAATCATTGGTATATCACCTGAACAAGCAGTCCCAAGACTTTCTCCACTCTGGTGGGCTGAACTGGAGATCTTGTCAGAGGAGGCAACTTAA 2400 0.4354 MRVARARAKCGPRSTVSVTTKARPTLRLLRRWAHLHLSSSDPSRLTADFPFNDRRSKPSRGPRLTLSLLPSLLGIEAIPSFFFVTILTQPLWHWLYKGMGLRFNPYGCWSNIYAALICLWSIRVCWSHNDEVMSLLEFRARIASDPHDALSNWKPTDRDPCEWLGIQCVDSKVKMLNLSGLSLEGTLAPELGKLTHLKSLVLCKNNFSGTIPRELGDLTKLELLDLRDNNLSGSIPAEIGRKLFLKDLFLFGNNIESNVPQDIGKLKLLGKSKFVDNGTSHLTAEVGCMNRKLGHCAWQSNLKQWNMEELLVIPIKGAITKYLSALTLPLFKLQNDHGYEESCFDNLPNESALAQNLLVNFERRKLLDDSSNLPAAPISVGPTKQIISLPTTLSSGAFPAVSNAYKNQNQSHTPLPSPAPLPSPASSGHETNQQPSANEEASGKTWKYIIIISGVLVLVIVVVAICCLWNKRAVKAIRPWKTGLSGQLQKAFITGVPKLNRAELEIACEDFSNIITTTPHCTTYKGTLSSGVEIAVISTLVTSAQDWSKNMEKGYRKKIDTLSRINHKNFINLIGYCEEEEPFTRMLVVEYAPNGTLFEHLHVEGLEHLDWNARVRVIMGVAYCLQYMHHDLNPPVAHSNLDSRSILLTDDFAAKILEDTFSSSTEDKSVSKNSELPPNADPETNVYSFGKLLFEIISGKLPDSEEQGQLEKLAGKFSNGKRSISYMIDPSLQSFKEKELDVICDVIQECVQPNPRLRPTMKDLISKLREIIGISPEQAVPRLSPLWWAELEILSEEAT 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2832 799 SUPERFAMILY Protein kinase-like (PK-like) 493 768 IPR011009 -
Dere02g2832 799 Pfam Leucine rich repeat N-terminal domain 128 168 IPR013210 -
Dere02g2832 799 PANTHER PROTEIN MALE DISCOVERER 2 117 796 - -
Dere02g2832 799 ProSiteProfiles Protein kinase domain profile. 387 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g2832 799 Pfam Protein tyrosine and serine/threonine kinase 544 768 IPR001245 GO:0004672|GO:0006468
Dere02g2832 799 FunFam Probable leucine-rich repeat receptor-like protein kinase At2g33170 128 280 - -
Dere02g2832 799 MobiDBLite consensus disorder prediction 407 439 - -
Dere02g2832 799 MobiDBLite consensus disorder prediction 424 439 - -
Dere02g2832 799 Gene3D Phosphorylase Kinase; domain 1 481 591 - -
Dere02g2832 799 SUPERFAMILY L domain-like 125 293 - -
Dere02g2832 799 Gene3D Transferase(Phosphotransferase) domain 1 592 778 - -
Dere02g2832 799 FunFam Inactive receptor-like serine/threonine-protein kinase 483 591 - -
Dere02g2832 799 Gene3D Ribonuclease Inhibitor 130 287 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2832 Dere-ChrDere02 31908945 31915609 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2832 168 781 Receptor kinase-like Gene Family AT5G65700 26.047 2.23e-41 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Dere02g2832 PK_Tyr_Ser-Thr 2.1e-19 CL0016