Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2831 ATGAGAAGGATGTCAGAAGGATACGAGATTGAAGACAACAAGAATAGCAGGTGTGCAGAGGAACAGGTGGCTGAGGACATTTCACTGGGATCTTCCCAGAAATGCTCATCCTTTGACTTGAATGAAGAAGCTAGCACTGAAGACAACAACAATGAAACAGACTGTGAGCTCATGGCTGATGAGAATGAGGAGATAGCAAAGGATGAGCATGAGGGTACTTCAGCAAATAGAAGCACATCAAGGGAAGGAAATGAAAGAAGAGGAACGGTGAGACAGTACATTAGATCGAAGATGCCTCGGCTTCGATGGACTCCAGACCTACATCTCTCCTTTGTTCACGCAGTTGAAAGGCTTGGTGGTCAAGAGAGAGCTACACCCAAGTTAGTGCTTCAGCTAATGAATGTTAGAGGGCTTAGCATTGCTCATGTCAAGAGTCACCTGCAGATGTACCGTAGCAAGAAACTTGACGAGGCCGGGCAAGTACTTGGTCAATCATACAGATCGACCCAAAAAGAAGGTCGTATGTCTCAGATATCCCATTCACATCAGTCCCTGAGCCCTCATCAGTACTTTAAGATGGGAAATGGTGGAATTATCCTGGCAAGTAATTGCAACGAACATGGTCTCGTTCAAGGTCTCTTTCAGCCCTCCTTCTCCCTATCTCGTTCACATACAAAGCCTACTGATTCAAGGCAGCAACAATGGCACTTGAATCATCAACATTTGAGAAGACCAAGTTTCACAACAGGCAACGAAGTGGTGGATACAAACAGCAAAATAGCACCCATGAGACCTAGCCAATTTCTGGAAGAGAAAAGGTGGCCTCCATTGGATATTATTAACACTCATCAATGGAAGTTCAGAAGGTTACCTACCAATTGCAGTACTGCTTGGGGTAATGCACATGCTGGCTCACAACCAGATGTACATCAATTAGGAACCACTCCTTCACCTGCTGGGGCAGCTGAATGGAGCCTTGCGAGCAACCTGCAACTTCAATCAAACTTCAACGAGCACTCTCGCAACCATTCCAATAGTCCAAAGCTAGATTTTGAACCCCCGTTTCGGATTAAGTTGAATCAAGGGATGCTGGGGGAAGACAAGCAATGGTTGCCTGATTTGCAACTGGGGTTGAGTCAGGGAGATGGCAAAGAAACCCAAGAAATTAGCACTAAGCTTTCACTTGCTTAA 1191 0.4551 MRRMSEGYEIEDNKNSRCAEEQVAEDISLGSSQKCSSFDLNEEASTEDNNNETDCELMADENEEIAKDEHEGTSANRSTSREGNERRGTVRQYIRSKMPRLRWTPDLHLSFVHAVERLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDEAGQVLGQSYRSTQKEGRMSQISHSHQSLSPHQYFKMGNGGIILASNCNEHGLVQGLFQPSFSLSRSHTKPTDSRQQQWHLNHQHLRRPSFTTGNEVVDTNSKIAPMRPSQFLEEKRWPPLDIINTHQWKFRRLPTNCSTAWGNAHAGSQPDVHQLGTTPSPAGAAEWSLASNLQLQSNFNEHSRNHSNSPKLDFEPPFRIKLNQGMLGEDKQWLPDLQLGLSQGDGKETQEISTKLSLA 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2831 396 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 78 184 IPR046955 GO:0003700
Dere02g2831 396 MobiDBLite consensus disorder prediction 299 313 - -
Dere02g2831 396 SUPERFAMILY Homeodomain-like 97 153 IPR009057 -
Dere02g2831 396 MobiDBLite consensus disorder prediction 299 320 - -
Dere02g2831 396 FunFam Myb family transcription factor 97 155 - -
Dere02g2831 396 MobiDBLite consensus disorder prediction 63 90 - -
Dere02g2831 396 Pfam Myb-like DNA-binding domain 101 151 IPR001005 -
Dere02g2831 396 MobiDBLite consensus disorder prediction 1 21 - -
Dere02g2831 396 MobiDBLite consensus disorder prediction 1 90 - -
Dere02g2831 396 MobiDBLite consensus disorder prediction 26 44 - -
Dere02g2831 396 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 95 155 IPR017930 -
Dere02g2831 396 NCBIfam myb-like DNA-binding domain, SHAQKYF class 99 154 IPR006447 GO:0003677
Dere02g2831 396 Gene3D - 98 155 - -
Dere02g2831 396 MobiDBLite consensus disorder prediction 45 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2831 Dere-ChrDere02 31883171 31887141 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2831 90 178 G2-like Transcription Factor Family AT2G42660 68.539 3.36e-35 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Dere02g2831 Myb_DNA-binding 1e-06 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere02g2831 02 31883171 31887141 Dere02g2831 02 31883171 31887141 ECH