Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2818 ATGGGGGATTTGCACGATTCTCTCGCGCCGCCGGTGAACCATTCCCGTCCCACGCCCGTCCGCGAAGATTGTTGGAGCGAGGAAGCTACCTCCACCCTCGTTGATGCTTGGGGTCGCCGTTACGTCGAGCTCAACCGCGGCAACCTCCGCCAGAAGGACTGGCAGGACGTGGCTGACGCTGTCAACGCTCTTCACGGTCATACCAAGAAGACGCATCGTACAGATGTTCAGTGTAAGAACCGCATCGATACCATTAAGAAGAAGTATAAGGTTGAGAAGACTAGGGTTTCTTCCCCAAATGGGGTTCCTTCCACTTGGCCTTTCTTCGATCGCTTAGATGCTTTGATTGGACCCACTTTGAATGCGAAGAAGGCGTCGTCGTCGCCTCCAGTGGCACTTCCTTTGCCTTATCGTAAAACTCCGTCCCCCGCACCTGCGTTGCCGGCGACGGCCGTGGCGCTGCCACAGAAGCGGTCGGCGGCAACGGTATTAGAGGATGGATACTTTAGGAGGAATTATTCGGCGATGGCAGCTGCAGCGGCTGCAGCAGAGGCCGATGAGGATGAGGACGAGGAGGAGGAGGAAGATGAAGATGAAGAGAGGGGAAGCGAGGTTGAGGAAGGAGAGAGGGAGAAGGAAGGGATGAGGAGGTTGGCAAAGGCAATAGAGAGGTTTGGGGAAGTGTATGAGAGAATGGAGAGAGAAAAAATGAGGCAGATGGTGGATTTGGAGAAACAGAGGATGCAGTTTGCCAAAGATCTGGAAGTACAAAGGATGCAGATGTTTATGGACACACAGGTTCAGCTGGAGAGGATCAAGCGCGGGAAGCGGTCTGGGTCTAATGATATGTATAGCTAG 858 0.5396 MGDLHDSLAPPVNHSRPTPVREDCWSEEATSTLVDAWGRRYVELNRGNLRQKDWQDVADAVNALHGHTKKTHRTDVQCKNRIDTIKKKYKVEKTRVSSPNGVPSTWPFFDRLDALIGPTLNAKKASSSPPVALPLPYRKTPSPAPALPATAVALPQKRSAATVLEDGYFRRNYSAMAAAAAAAEADEDEDEEEEEDEDEERGSEVEEGEREKEGMRRLAKAIERFGEVYERMEREKMRQMVDLEKQRMQFAKDLEVQRMQMFMDTQVQLERIKRGKRSGSNDMYS 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2818 285 Coils Coil 215 249 - -
Dere02g2818 285 Coils Coil 180 200 - -
Dere02g2818 285 Pfam Myb/SANT-like DNA-binding domain 22 115 IPR044822 -
Dere02g2818 285 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 14 276 IPR044823 -
Dere02g2818 285 MobiDBLite consensus disorder prediction 179 215 - -
Dere02g2818 285 FunFam trihelix transcription factor ASIL2 25 91 - -
Dere02g2818 285 MobiDBLite consensus disorder prediction 1 23 - -
Dere02g2818 285 MobiDBLite consensus disorder prediction 183 204 - -
Dere02g2818 285 Gene3D - 25 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2818 Dere-ChrDere02 31767339 31775641 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2818 15 284 Trihelix Transcription Factor Family AT3G14180 33.521 4.90e-50 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Dere02g2818 Myb_DNA-bind_4 9.7e-26 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere02g2818 02 31767339 31775641 Dere02g2818 02 31767339 31775641 ECH