Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dere02g2815 | ATGGCCGAAGTGCAGAACGGCCAAGACAGTCAAGGGATTAAGCTGTTCGGAGCTACGATCACGTTGCATACTGGAAGACAGGTGGTGAAAGACGTGGATCAGAAATGCGGCGAGGATCGGACGGCGGAGAAGAGGCCCGACAAGATACTACCGTGTCCGAGGTGCAAGAGCATGGAGACCAAGTTTTGTTACTTCAACAATTACAACGTTAATCAGCCTAGGCATTTCTGTAAGGGGTGCCAGAGGTACTGGACCGCCGGCGGCGCACTCCGGAACGTGCCGGTAGGCGCCGGCCGGCGGAAGGCCAAGCCGCTGTGCCGTGGGGCTGCTGGGTTGTCGGAGGGATGTGGCTATGAGGAGTCCGTCGACGGCGGCCACCGCCAGTTTGAGATGGATGAAGGGTTGAATATTGTGGACGAGTGGCATGCTGCGATGGCTCAGGGTGATTTCCGGCAGCTTTTGCCTGCGAAACGGCGGAGAAACGCCTTGGGCGGTCAACCTCTTTAA | 507 | 0.5779 | MAEVQNGQDSQGIKLFGATITLHTGRQVVKDVDQKCGEDRTAEKRPDKILPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKAKPLCRGAAGLSEGCGYEESVDGGHRQFEMDEGLNIVDEWHAAMAQGDFRQLLPAKRRRNALGGQPL | 168 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dere02g2815 | 168 | ProSiteProfiles | Zinc finger Dof-type profile. | 50 | 104 | IPR003851 | GO:0003677|GO:0006355 | |
Dere02g2815 | 168 | ProSitePatterns | Zinc finger Dof-type signature. | 52 | 88 | IPR003851 | GO:0003677|GO:0006355 | |
Dere02g2815 | 168 | PANTHER | CYCLIC DOF FACTOR 2 | 35 | 103 | IPR045174 | GO:0003700|GO:0006355 | |
Dere02g2815 | 168 | Pfam | Dof domain, zinc finger | 47 | 103 | IPR003851 | GO:0003677|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dere02g2815 | Dere-ChrDere02 | 31707090 | 31707596 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dere02g2815 | 8 | 166 | C2C2-Dof Transcription Factor Family | AT1G29160 | 57.955 | 3.52e-58 | 177 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2C2-Dof | Dere02g2815 | zf-Dof | 1.6e-32 | No_clan |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Dere02g2815 | 02 | 31707090 | 31707596 | Dere02g2815 | 02 | 31707090 | 31707596 | ECH |