Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2788 ATGCTTCACGGCTTCTCCTCCCAGAGCCATAGGCTCAACCAAATCCCCAATTCGACATTTGACAACATGCAAATGGTCAAAGTCTCAGAAACCACTCTCATCCTCCCTTCTCGGCCTCCCTTCATCCACGACCATGCCCTCTCTCTCTCTCACCTCGACACCGATCGTAACCTCTACCTCACCTTCCGCTATCTTCGGGCCTACGTCAACAACGACACCTCCTCCGCCGACCCTTTCCTCGTTATCTCTTCCGCCATCTCCGAAGCTCTGGTTCACTATTACCCACTCGCCGGCACGCTCCGCCGCCGCCAGCACGAAGACCAACGCCTCGAGGTTTGGTGCGCCGCCGGCCAAGGCGTCCCTCTGATTCGGGCTAATGTGGATTTCACGCTTGACGAAGTGAACTATCTCGACGAACCCGAGACTCCTTTCATTGAACAGTTGGTGCCCAACCCGGACTCGGACGAGGCGATGAACGACCCTTGTGTTCTACAAATCACGGCGTTCAAGTGCGGTGGGTTCACTCTTGGGGCAGCGATACACCACTCCTTGTGCGACGGACTCGGCGCGACTCAGTTTTTCAGTGCAGCGGCTGAGTTGGCTCGCGGAGCGACCCGGGTGTCGGTGGAGCCCATTTGGGATCGTGAGAAGTTGCTGGGTCCTAGAGACCCTACTCGTATTGATTCGCCGGTGATCCAGGAGTTTCTGCATTTAGACAAGGGGTTCTCGCCGTACAAACAGGAAATTGGTCCGATTGTGAGAGCCTGCTTTCATGTGAGAGACGAGTGCTTGGACAGGTTCAAGAGCTCGCTATTTGAGCAATCTGGGTTGAACTTCACCACTTTTGAGGCTTTGGGTGCATATATTTGGAGATCCAAGGTTAAGGCCTCAGGGATTCAAGCTGATGAAAAGATTAAGTTTGTATACTCAATTAACGTACGGAAACTAATGAAGCCGTCGCTTCCAGTAGGCTATTGGGGCAATGGTTGTGTTCCAATGTATGTGCAGCTGACGGCCAAAGACTTGATAGATAAACCCATTTGGGAAACAGCAGAGCAAATCAAAAAGAGCAAAAGCAATGTGAGTGATGAATATGTGCGCTCCTTCATTGATTTTCAGGAGATGCATTATGTGGACGGGATCACATCAGGAAAAGGGGTGAGTGGGTTCACAGACTGGAGACACTTGGGGCATTCCACAGTGGATTTTGGGTGGGGAGGTCCAGTCACTGTTTTGCCTCTTGCGAAGAACCTCCTTGGAAGTGTTGAGCCTTCCTTCTTCTTGCCTTATTCAACAGCTCGCGCAGGCAAGAAGGATGGGTTCAAGGTTCTGGTGACTTTGGCAGAGGCTGCCTTGCCTGTTTTCAGAGAGGACATGCAAGTGTTTTGCTGA 1392 0.5201 MLHGFSSQSHRLNQIPNSTFDNMQMVKVSETTLILPSRPPFIHDHALSLSHLDTDRNLYLTFRYLRAYVNNDTSSADPFLVISSAISEALVHYYPLAGTLRRRQHEDQRLEVWCAAGQGVPLIRANVDFTLDEVNYLDEPETPFIEQLVPNPDSDEAMNDPCVLQITAFKCGGFTLGAAIHHSLCDGLGATQFFSAAAELARGATRVSVEPIWDREKLLGPRDPTRIDSPVIQEFLHLDKGFSPYKQEIGPIVRACFHVRDECLDRFKSSLFEQSGLNFTTFEALGAYIWRSKVKASGIQADEKIKFVYSINVRKLMKPSLPVGYWGNGCVPMYVQLTAKDLIDKPIWETAEQIKKSKSNVSDEYVRSFIDFQEMHYVDGITSGKGVSGFTDWRHLGHSTVDFGWGGPVTVLPLAKNLLGSVEPSFFLPYSTARAGKKDGFKVLVTLAEAALPVFREDMQVFC 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2788 463 Gene3D - 243 459 IPR023213 -
Dere02g2788 463 PANTHER ACYL TRANSFERASE 4 25 461 - -
Dere02g2788 463 Gene3D - 21 235 IPR023213 -
Dere02g2788 463 Pfam Transferase family 25 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2788 Dere-ChrDere02 31354984 31357146 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2788 81 413 Monolignol Biosynthesis Gene Families AT5G48930 31.429 2.58e-42 153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere02g2788 02 31354984 31357146 Dere02g2788 02 31354984 31357146 ECH