Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2773 ATGGCGGCTATTCATAGCAATCAACCTGCAGCTTCTGAGGGCATTCTTGAGAACGTATGGGCTAAAATTATCAGCAGTAATGGATCACAGTGGGAAGAAATGCCTAATCTGGATGGAAGAGGAGGGTCTATGGAAGTTCTGAAGAGGCTTCCAAGTTTAGGAAGATGGATATCAATGGGAGCTGAGTTCTGGGAAGATATCTTAGATGGGTTTCCACCTTCTAGCAGCAACAACTTGGAAACTTGGAGTGACTTTGAATCCAGTAAGAGGGTTGAAGAAGAAGAAGCAGATGCTGTGAAAGTGAAAGCAGAGAAGAAGGAAGCTGCAAAACACTACAGAGGAGTAAGGAGAAGGCCATGGGGAAAATATGCAGCAGAAATCAGAGACTCGTCCAGGAAAGGAGCAAGAGTTTGGCTTGGGACTTTTGACACTGCTGAGGAAGCAGCTTTGGCTTATGATAAAGCAGCTTTGAGAATTAGAGGTCCTAAGGCATACCTCAATTTCCCACTTGAGACTGTATCAAAGGCCTTAGGATTTGACCAGAAAGGAGCTTGTGAAGAAAATTACTGCAATTCCAGGAAGAGGGGGTCGAGGGAAGGAGAAGAACTTGGTGGTGTGATGAATGAAGAACCTGCAACAAAAAGAATGGCAAGCTTGGGAGGGATGCTAGAGGATGAAGTAGATGTTTTTGAGTTTCAGGACTTGGGGAGTGATTATTTGGAAAGTTTGTTATCTTCTTTTTGA 744 0.4395 MAAIHSNQPAASEGILENVWAKIISSNGSQWEEMPNLDGRGGSMEVLKRLPSLGRWISMGAEFWEDILDGFPPSSSNNLETWSDFESSKRVEEEEADAVKVKAEKKEAAKHYRGVRRRPWGKYAAEIRDSSRKGARVWLGTFDTAEEAALAYDKAALRIRGPKAYLNFPLETVSKALGFDQKGACEENYCNSRKRGSREGEELGGVMNEEPATKRMASLGGMLEDEVDVFEFQDLGSDYLESLLSSF 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2773 247 PANTHER DNA-BINDING DOMAIN 80 192 IPR044808 GO:0003700|GO:0009873
Dere02g2773 247 FunFam Ethylene-responsive transcription factor 2 110 171 - -
Dere02g2773 247 Coils Coil 91 111 - -
Dere02g2773 247 Pfam AP2 domain 111 161 IPR001471 GO:0003700|GO:0006355
Dere02g2773 247 SUPERFAMILY DNA-binding domain 111 171 IPR016177 GO:0003677
Dere02g2773 247 PRINTS Ethylene responsive element binding protein signature 112 123 IPR001471 GO:0003700|GO:0006355
Dere02g2773 247 PRINTS Ethylene responsive element binding protein signature 135 151 IPR001471 GO:0003700|GO:0006355
Dere02g2773 247 ProSiteProfiles AP2/ERF domain profile. 111 169 IPR001471 GO:0003700|GO:0006355
Dere02g2773 247 CDD AP2 110 169 IPR001471 GO:0003700|GO:0006355
Dere02g2773 247 SMART rav1_2 111 175 IPR001471 GO:0003700|GO:0006355
Dere02g2773 247 Gene3D AP2/ERF domain 110 171 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2773 Dere-ChrDere02 31226620 31227363 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2773 15 247 AP2-EREBP Transcription Factor Family AT4G18450 35.691 1.46e-41 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Dere02g2773 AP2 2e-16 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere02g2773 02 31226620 31227363 Dere02g2773 02 31226620 31227363 ECH