Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2772 ATGGGTTTGACCTCCCAGACAGAGGAACTTCCATTCAACGAGAACGACCCACAAGACATGGTCATATACCAAGTCCTCCACGAGGCCAATGCACTCCACCCCACCAACACCGCCGCCGCCACAGCTGCTACCGCCGCCTCATTCATCCCGCAGAGGCACCAAGCCGCCGCGCTGACCGGCCTGGAGCCGGCCAGGACCGTCGGAAAGAAGCACTACAGAGGCGTGAGGCGGCGGCCGTGGGGGAAGTACGCGGCGGAGATCCGCGACTCCGCCCGCCACGGAGCACGCGTGTGGCTCGGCACGTTCGAAACTGCGGAGGAGGCCGCCATGGCTTATGATCGAGCAGCTTTTAAAATGAGAGGTGCTAAGGCTTTGCTCAATTTCCCAGCTGAAATTGTTGCTTCTTCTATGGAGTTTCCTTCTGATTCTAAACGTGGTTCGAGCTCTGGGAAATTCTGTAATCAGGATTCGGATTCAAGTGCTAGCAGCTCCTGCACTAATTCCATTGGGACGAGTAGCACAGACATTATCAGATGTCTGAGTTTAACTGATTCTCGAGGAACACGAAGGATATGGGACCAGACAGAAGAGGGGGAACCTGGTGAAGGTTTTACTGTGATGGGTTGGTTTTTAGAACGAGTAATAAAAGTTGGGATAGAATTTCAGAGGCTTGAGGAGTACAGAATCCTTATAGTTGATTTTGCTGAAGCAGATGCTGAGGATGACTAG 729 0.5309 MGLTSQTEELPFNENDPQDMVIYQVLHEANALHPTNTAAATAATAASFIPQRHQAAALTGLEPARTVGKKHYRGVRRRPWGKYAAEIRDSARHGARVWLGTFETAEEAAMAYDRAAFKMRGAKALLNFPAEIVASSMEFPSDSKRGSSSGKFCNQDSDSSASSSCTNSIGTSSTDIIRCLSLTDSRGTRRIWDQTEEGEPGEGFTVMGWFLERVIKVGIEFQRLEEYRILIVDFAEADAEDD 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2772 242 Gene3D AP2/ERF domain 70 131 IPR036955 GO:0003700|GO:0006355
Dere02g2772 242 PANTHER DNA-BINDING DOMAIN 50 163 IPR044808 GO:0003700|GO:0009873
Dere02g2772 242 MobiDBLite consensus disorder prediction 139 169 - -
Dere02g2772 242 PRINTS Ethylene responsive element binding protein signature 95 111 IPR001471 GO:0003700|GO:0006355
Dere02g2772 242 PRINTS Ethylene responsive element binding protein signature 72 83 IPR001471 GO:0003700|GO:0006355
Dere02g2772 242 FunFam Ethylene-responsive transcription factor 2 70 131 - -
Dere02g2772 242 Pfam AP2 domain 71 121 IPR001471 GO:0003700|GO:0006355
Dere02g2772 242 SUPERFAMILY DNA-binding domain 71 131 IPR016177 GO:0003677
Dere02g2772 242 CDD AP2 70 130 IPR001471 GO:0003700|GO:0006355
Dere02g2772 242 ProSiteProfiles AP2/ERF domain profile. 71 129 IPR001471 GO:0003700|GO:0006355
Dere02g2772 242 SMART rav1_2 71 135 IPR001471 GO:0003700|GO:0006355
Dere02g2772 242 MobiDBLite consensus disorder prediction 140 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2772 Dere-ChrDere02 31211917 31212934 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2772 10 137 AP2-EREBP Transcription Factor Family AT3G23240 49.219 6.23e-37 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Dere02g2772 AP2 2.3e-15 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere02g2772 02 31211917 31212934 Dere02g2772 02 31211917 31212934 ECH