Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2769 ATGGGGAGAATCGAAGCAACGAAAGGGCAACCTACTTCTGAAACAAAGCTTTCTTTTAGGGTTCGCAGACTTCAGTTCAGTGGTCGTCATCTTCAGCCATCATCATCATGGCTTCCTCTAACTCGAACAGACACTGGCCAAGCATGTTCAAGTCCAAGCCTCGCAACTCCGACCACCACCAATGGCAGCACGACAGTATCAACTCCTCTCTCATCTCACCTTCAAACTGCCACAGAACCCCTTACACTTCAGAATCGTAAATCCAGAAGCAAGCACAAGCTTCGCCACCTTCACAACTCCTCTAATTCCTCGCACAAGTCCTCCTCTCCCAAAGAAATCGTAATCCCATCTAATAATAAGGGATTGGTCTCTAATATTGCCTTCTCTAACGTCACTACTGATACTGTAGTTCCCAATTCTCTCACTCCACCTCCACTTTTATCTCAGCCTTTCTTGTTTCCTCTGCACCATAGTGGAGGAGTGGCTAATGCTACTGCTACTGCTGGTCCTAATACACAAGGTTTTTGCTTCTCTGAACTATCAAATGTGGTTCAACGTCAAACTCCTCATGATCATCATCTTCGACAAATTAATGTTGGGCCTTGCACTGCTAGTCTCTTGCTTACTGAGATCATGAACCATACACCCAAGAATGACCAAGACAAAGTCATGCAAATGCAACAACACCCTCCAGCCGGCACTCTCACTACTGTCCTTCCCGCTAGAACCAGCACTGTCACTGTTCCATCCCCCGTCTCTTCTATTCTAGGTGTGGCAGCGAGGCCAGTGGGCCTAGCAGGCGGTGGTACGGCGAAATCTACGGTGTTCATAAACGACGTCGTATTTGAGGTGGACGTGGGGCCCTTCAACGTGCGGGAGGCCTTCGGCGAAGATGCGGTGCTCCTCCACGCCTCCGGTCAGCCTGTGCTCACCAACGAGTGGGGCGTCACCCTCCAGCCACTCCAGCACGGCGCATTTTATGACCTGGGTTTCCGTTACCGTATGGGAATAGAAATGATCAGTGGACCTCGAGAAAAGGGAGAGAGTGCATGGCAAATGGGGGCGTACAGAGCGGATGACGATTACGACTATCTCTTCAAGGTTGTGCTCATCGGTGACTCCGGCGTCGGCAAATCCAATCTCCTCTCCAGATTCACCAAGAATGAGTTCAGCCGCGAATCCAAGTCCACCATCGGTGTCGAGTTCGCCACCCGAAGCATTCGGGTCGACGATAAGGTTGTCAAGGCTCAGATTTGGGACACCGCCGGCCAAGAAAGGTACCGAGCAATCACTAGCGCATATTACCGGGGGGCTGTTGGTGCTCTACTAGTGTACGATGTTACACGCCATGTAACATTCGAGAACGTGGAGAGATGGCTGAAGGAGCTGAGGGGTCACACAGATGCCAACATTGTGGTGATGCTGGTAGGCAACAAAGCCGATCTCCGCCACTTGCGGGCGGTTTCCACCGATGATGCCACCGCTTTCGCCGAGCGAGAGAACACATTCTTCATGGAGACATCTGCCCTGGAGTGCATGAACGTGGAGAATGCCTTCACGGAAGTGCTGTCTCAGATATATCGTGTGGTGAGCAAGAAGGCCCTGGACATTGGGGATGATCCTGCGGCTTTGCCTAAGGGACAGACCATTAATGTTGGGTCGCGAGATGATGTTTCAGCTGTGAAGAATGCTGGATGCTGCTCTGCTTGA 1710 0.5135 MGRIEATKGQPTSETKLSFRVRRLQFSGRHLQPSSSWLPLTRTDTGQACSSPSLATPTTTNGSTTVSTPLSSHLQTATEPLTLQNRKSRSKHKLRHLHNSSNSSHKSSSPKEIVIPSNNKGLVSNIAFSNVTTDTVVPNSLTPPPLLSQPFLFPLHHSGGVANATATAGPNTQGFCFSELSNVVQRQTPHDHHLRQINVGPCTASLLLTEIMNHTPKNDQDKVMQMQQHPPAGTLTTVLPARTSTVTVPSPVSSILGVAARPVGLAGGGTAKSTVFINDVVFEVDVGPFNVREAFGEDAVLLHASGQPVLTNEWGVTLQPLQHGAFYDLGFRYRMGIEMISGPREKGESAWQMGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSRESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDANIVVMLVGNKADLRHLRAVSTDDATAFAERENTFFMETSALECMNVENAFTEVLSQIYRVVSKKALDIGDDPAALPKGQTINVGSRDDVSAVKNAGCCSA 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2769 569 ProSiteProfiles small GTPase Ras family profile. 360 569 IPR001806 GO:0003924|GO:0005525
Dere02g2769 569 SMART rab_sub_5 366 529 - -
Dere02g2769 569 CDD Rab11_like 363 527 - -
Dere02g2769 569 PRINTS Transforming protein P21 ras signature 389 405 - -
Dere02g2769 569 PRINTS Transforming protein P21 ras signature 407 429 - -
Dere02g2769 569 PRINTS Transforming protein P21 ras signature 504 526 - -
Dere02g2769 569 PRINTS Transforming protein P21 ras signature 366 387 - -
Dere02g2769 569 PRINTS Transforming protein P21 ras signature 469 482 - -
Dere02g2769 569 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 361 531 IPR027417 -
Dere02g2769 569 ProSiteProfiles small GTPase Rab1 family profile. 361 567 - -
Dere02g2769 569 FunFam ras-related protein RABA1f 358 567 - -
Dere02g2769 569 MobiDBLite consensus disorder prediction 32 84 - -
Dere02g2769 569 PANTHER DRAB11-RELATED 358 553 - -
Dere02g2769 569 NCBIfam small GTP-binding protein domain 364 522 IPR005225 GO:0005525
Dere02g2769 569 ProSiteProfiles small GTPase Rho family profile. 359 530 - -
Dere02g2769 569 SMART rho_sub_3 368 525 IPR001806 GO:0003924|GO:0005525
Dere02g2769 569 Gene3D - 358 567 IPR027417 -
Dere02g2769 569 MobiDBLite consensus disorder prediction 32 112 - -
Dere02g2769 569 SMART ras_sub_4 363 529 - -
Dere02g2769 569 SMART ran_sub_2 371 566 - -
Dere02g2769 569 Pfam Ras family 367 527 IPR001806 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2769 Dere-ChrDere02 31172431 31179033 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2769 83 329 Wox Gene Family AT5G45980 32.463 5.07e-21 92.4