Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dere02g2756 | ATGGACAGCCATGGAGCAGAAGAGTTGTTTCAAGCTCAGGCTCATCTGTATAAGCTCATATTCAACTTCTTTAGCTCCATGTGTCTTAAAAGTGCAATTGAGCTTGGCATACCAGACATAATCCACAGCCATGGCCAACCCATCACTCTCCCTGAGCTGGTCATGGCCCTCAAGATTGATCCTTCAAAATCTGGATTTCTCTATAGGCTCATGCGCTTACTGGTTCACTCTGGCCTTTTTGTCGCAACCAAAGTTTCCAAAGGTGACAAGGAAGAAGAAAAAGAGGGCTATGATCTCACACCTTCTTCTAGGCTTCTTCTCAAAGACAATGTCCCTAACTTGACTCCATTTGCTCAGGCAGCTTTTCACCCTGCTCTGTCAAGCGCATGGCAGTTACTGGGAGACTGGTTCTACAGAGATGAGGTGAACCCTTTCCACTCTATGTTTGGGATGGGGTTTTGGGAGTACGGAAGTGAGAACCCTGAGTTCAGTAAGCTTTTCAACGAAGCTATGGTTAGTGATTCTGGGATGATGAACTTGGTGATCAGAGATTGCAAAGCAGTTTTCGAGGGTATAAACTTGTTGGTTGATGTTGGGGGTGGTACAGGAGCGGCAGCTAGAATCATTTCTGAGGAATTTCCCGGTATGAAATGCACAGTGCTTGATCTTCCTCATGTTGTTTCCCATCTGCAAGATGGTGAAAATCTCAAGTTTGTTGGAGGTGACATGTTTCATTCTATTCCTTCAGCTGACGCCATTCTTCTCAAGTTGGTCCTACATGCTCACAGTGACGAAGAGTGCTTGAAGGTGCTGAAGAAATGCAGAGAGGCTATTTCAAGCAAAGGAAAAGAAGGAAAAGTGATAATAATCGACATAGTGATAAATGAGAAGTTGACAGAACCAAAACTGTTCTTTGATTTACTGATGATGGTTGCAGTCACTGGAAGAGAAAGAGAGGAAAGAGAATGGGAGAAGCTCTTCTTGGAAGCAGGGTTCAGTCATTATAAGATAACCCCTATTTTCGGTTTAAGGTCGCTTATTGAAGTTTATCCGTAA | 1056 | 0.4375 | MDSHGAEELFQAQAHLYKLIFNFFSSMCLKSAIELGIPDIIHSHGQPITLPELVMALKIDPSKSGFLYRLMRLLVHSGLFVATKVSKGDKEEEKEGYDLTPSSRLLLKDNVPNLTPFAQAAFHPALSSAWQLLGDWFYRDEVNPFHSMFGMGFWEYGSENPEFSKLFNEAMVSDSGMMNLVIRDCKAVFEGINLLVDVGGGTGAAARIISEEFPGMKCTVLDLPHVVSHLQDGENLKFVGGDMFHSIPSADAILLKLVLHAHSDEECLKVLKKCREAISSKGKEGKVIIIDIVINEKLTEPKLFFDLLMMVAVTGREREEREWEKLFLEAGFSHYKITPIFGLRSLIEVYP | 351 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dere02g2756 | 351 | PANTHER | O-METHYLTRANSFERASE | 8 | 336 | IPR016461 | GO:0008168 | |
| Dere02g2756 | 351 | SUPERFAMILY | "Winged helix" DNA-binding domain | 7 | 110 | IPR036390 | - | |
| Dere02g2756 | 351 | ProSiteProfiles | SAM-dependent O-methyltransferase class II-type profile. | 17 | 351 | IPR016461 | GO:0008168 | |
| Dere02g2756 | 351 | Pfam | O-methyltransferase domain | 130 | 333 | IPR001077 | GO:0008171 | |
| Dere02g2756 | 351 | Pfam | Dimerisation domain | 27 | 75 | IPR012967 | GO:0046983 | |
| Dere02g2756 | 351 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 113 | 350 | IPR029063 | - | |
| Dere02g2756 | 351 | Gene3D | Vaccinia Virus protein VP39 | 107 | 351 | IPR029063 | - | |
| Dere02g2756 | 351 | FunFam | O-methyltransferase ZRP4 | 108 | 351 | - | - | |
| Dere02g2756 | 351 | CDD | AdoMet_MTases | 195 | 294 | - | - | |
| Dere02g2756 | 351 | FunFam | Coniferyl alcohol 9-O-methyltransferase | 1 | 106 | - | - | |
| Dere02g2756 | 351 | Gene3D | - | 1 | 106 | IPR036388 | - | |
| Dere02g2756 | 351 | PIRSF | O-mtase | 1 | 351 | IPR016461 | GO:0008168 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Dere02g2756 | Dere-ChrDere02 | 31063105 | 31064426 | Proximal |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Dere02g2756 | 27 | 349 | Monolignol Biosynthesis Gene Families | AT5G54160 | 33.333 | 1.06e-45 | 158 |