Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2754 ATGCTTTACGGAGATAGCCCATTAGTTAGCAACCTCTTGAAAGTGCTCATTGCATCGCATGTGTGGGATGAGTTTATCAATGGGGATGTTTCCTCCTGGGTTTCTTCGAATCTTAACAAACAGGGTGGGAGACAAGAGGACTCTGTTTGCAAAGAAATCTCTGTTGTGTCGGACAAAAAAAAGATGTGGAGAACGAAGAGAGAGGAATCGGCAAAGATGGCTATCAACCGAGGCCAGGTAGAGGCAGAGTTGTTTCACGCTCAGTCCCATCTGTACAAACATATATACAATTTCTTAGGCTCTATGTGTCTAAAGAGTGCAGTGCAGCTGAACATACCAGATAAAATCCACAGCCACGGCCGACCCATCACCCTTCCTGAGCTGCTCTTGGCTCTCCAGATTGACCCTGCAAAATCTGGTCATGTCTATAGGCTCATGCGCTTATTGGTTCACAATGGCTTCTTTGCTACTACCAAAGTTCCTATAGGTGATGGGGAAGAAGAGGGATATGATCTCACACCTTCCTCCAGGCTCCTCCTTAAAGACAATGTCCCAACCTTGTCTCCTTTCGTTCAGGCAATGTTTCATACAGCTATAGTGCATTCATCAGAATGCATCGGAGATTGGTTTCGAAGTAATGAGCTCTCCCCCTTTCATACTGCACATGGGATGGGATTTTGGGACTATCTCAACCAAAACCAAGATTTTAACAGAGTCTTCAATGATGCAATGATTAGTGATTCTAGTATGATGAACTTGGTCATTACAGATTGCAAATCAATTTTTGAAGGATTCAATTCATTGGTTGATGTTGGGGGTGGTAAAGGAGCTATGGCTAGGATCATTTCAGAGTCAATGCCTAATCTTCAATGCACTGTGCTAGATCTTCCACATGTTGTTGAAAACTTGCAGGATAGCAGTAACTTGAAATTCGTTGGAGGGGATATGTTTCAGTCTATTCCTCCAGCAGACACCATTCTCCTTAAGTTGGTTTTACATGCTTATAGTGATGAAGACTGCGTGAAGGTACTCAAGAAGTGCAGGGAAGCTATTGCAAGCAAAGGCAAGATAGGGAAAGTGATCATTATAGACATAGTGATCAATGAGAAGGATGAGGAACACGAACTGAAAGACGCGAAGCTCTTCTTTGATGTGTTGATGATGACTGTGGTCACTGGAAGAGAGAGGGAGGAAAAAGAATGGGAGAAGCTGTTCCTGGAAGCTGGGTTCAGTCACTACAAGCTAACACCCATCTTTGGTCTGAGGTCCCTTATTGAAGTTTACCCTTGA 1290 0.4364 MLYGDSPLVSNLLKVLIASHVWDEFINGDVSSWVSSNLNKQGGRQEDSVCKEISVVSDKKKMWRTKREESAKMAINRGQVEAELFHAQSHLYKHIYNFLGSMCLKSAVQLNIPDKIHSHGRPITLPELLLALQIDPAKSGHVYRLMRLLVHNGFFATTKVPIGDGEEEGYDLTPSSRLLLKDNVPTLSPFVQAMFHTAIVHSSECIGDWFRSNELSPFHTAHGMGFWDYLNQNQDFNRVFNDAMISDSSMMNLVITDCKSIFEGFNSLVDVGGGKGAMARIISESMPNLQCTVLDLPHVVENLQDSSNLKFVGGDMFQSIPPADTILLKLVLHAYSDEDCVKVLKKCREAIASKGKIGKVIIIDIVINEKDEEHELKDAKLFFDVLMMTVVTGREREEKEWEKLFLEAGFSHYKLTPIFGLRSLIEVYP 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2754 429 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 92 429 IPR016461 GO:0008168
Dere02g2754 429 Pfam Dimerisation domain 102 150 IPR012967 GO:0046983
Dere02g2754 429 Gene3D Vaccinia Virus protein VP39 180 429 IPR029063 -
Dere02g2754 429 SUPERFAMILY "Winged helix" DNA-binding domain 80 183 IPR036390 -
Dere02g2754 429 Pfam O-methyltransferase domain 207 411 IPR001077 GO:0008171
Dere02g2754 429 PANTHER O-METHYLTRANSFERASE 83 414 IPR016461 GO:0008168
Dere02g2754 429 FunFam O-methyltransferase ZRP4 181 429 - -
Dere02g2754 429 FunFam Coniferyl alcohol 9-O-methyltransferase 74 179 - -
Dere02g2754 429 Gene3D - 74 179 IPR036388 -
Dere02g2754 429 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 186 428 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2754 Dere-ChrDere02 31033650 31035837 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2754 102 427 Monolignol Biosynthesis Gene Families AT5G54160 32.537 2.71e-45 159