Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2748 ATGACATGGTGCAATGAGTCTGAAGATGATGGGGGGATTCAAATAATCGATCCCACTCCTCAAAGACCCAAATCCTCTGGAATTCGAACTATTACTTGCCCTTCATGCGGCCATACCCTAGAATTTCAAGATCAGGGTGAAATACATGAGTTGCCGGGTCTGCCAGCTGGAGTGAAGTTCGATCCGAATGAGCAAGAGATATTAGAACATTTGGAGGCAAAAGTTGAGTGTGATGTTCGTAAGCTTCATCCTCTTATTGATCAGTTCATCCCAACACTTGAAGGCGAGAATGGCATCTGTTACACACACCCAGAAAAGCTACCAGGAGTAAGCAAAGATGGGCAAATTCGCCACTTCTTTCACAGGCCTTCCAAAGCATACACAACAGGGACGAGGAAAAGAAGAAAGGTTCACACAGACGAAGAAGGAAGCGAGACAAGATGGCACAAAACAGGCAAAACAAGACCAGTATTCGTTAATGGCGCAGTGAAGGGTTTCAAGAAGATACTGGTGCTCTACACCAACTATGGCAGAAAAAGGAAGCCCGAGAAGACCAGCTGGGTGATGCATCAGTACCACCTTGGAACCAACGAAGAAGAGAAAGAAGGAGAGCTCGTGGTTTCCAAGGTTTTCTACCAGACACAACCTAGACAATGTGGTTCCATTAACATTAAGGATCCATGTGAAAAACCATTGAACACCCAGACGAGGATTAATGATCGTGACAGCTGCACAACAATGATACCTAATAAGAATAATGGACCTGGTCTTTTAGAGTATTACAGTTCTTCTTACATGAATTATGACCATGCGGTGGGTCATAATGTTGCAGATAGCTCACCTCATGAGCTTATTCCAAACTTGGTTCTCCAAGGGGATGCCTCTTCTTTCTTTTCCTTCAGCCATGGATTGAAGCAAAGCAAGGCGTGA 930 0.4452 MTWCNESEDDGGIQIIDPTPQRPKSSGIRTITCPSCGHTLEFQDQGEIHELPGLPAGVKFDPNEQEILEHLEAKVECDVRKLHPLIDQFIPTLEGENGICYTHPEKLPGVSKDGQIRHFFHRPSKAYTTGTRKRRKVHTDEEGSETRWHKTGKTRPVFVNGAVKGFKKILVLYTNYGRKRKPEKTSWVMHQYHLGTNEEEKEGELVVSKVFYQTQPRQCGSINIKDPCEKPLNTQTRINDRDSCTTMIPNKNNGPGLLEYYSSSYMNYDHAVGHNVADSSPHELIPNLVLQGDASSFFSFSHGLKQSKA 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2748 309 SUPERFAMILY NAC domain 47 213 IPR036093 GO:0003677|GO:0006355
Dere02g2748 309 Gene3D NAC domain 63 217 IPR036093 GO:0003677|GO:0006355
Dere02g2748 309 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 27 246 IPR044799 GO:0003700
Dere02g2748 309 Pfam No apical meristem (NAM) protein 55 194 IPR003441 GO:0003677|GO:0006355
Dere02g2748 309 FunFam NAC domain-containing protein 73 63 217 - -
Dere02g2748 309 MobiDBLite consensus disorder prediction 1 28 - -
Dere02g2748 309 ProSiteProfiles NAC domain profile. 54 213 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2748 Dere-ChrDere02 30936587 30939357 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2748 1 220 NAC Transcription Factor Family AT4G28500 71.366 5.79e-119 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dere02g2748 NAM 6.4e-21 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere02g2748 02 30936587 30939357 Dere02g2748 02 30936587 30939357 ECH