Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2746 ATGCTTCCCCTGCTTCTTCTGCTCTGTTTTCTCTTCCCACCTCCATCTACTCTCTCTCTGAACCAGGATGGTCTCTACCTCTACCAATTCAAGCTCTCTGTGGATGATCCTGAGTCCTCCCTCTCCTCCTGGAACGACCGCGATGCCCACCCCTGCTCCTGGTCCGGCGTCACCTGTGACTCCACGAATAGCTCCGTCATCGAACTTAACCTCTCCAACTCTAACATCGCCGGCCCATTCCACGCTTCCGTTCTCTGCCGTCTTACCAACCTCACCTCCCTCACCCTCTTCAACAACTCCATCAACGACACCCTCCCTTCTGAAATCTCACTCTGTCGAAGCCTCGTTCACGTTGACCTCTCCCAGAACCTCCTCACCGGTGCTCTTCCCCACTCCTTGTCGGAGCTTCCCAACCTCAGGTACCTGGACTTGACCGGCAACAACTTCTCTGGCCCCATACCTGATTCCTTTGGCCAGTTTCAGAAGCTCGAGGTTATCTCTCTCGTCTACAATCTTCTAGACGGAACAATACCCGCTTCCCTCGGAAACATTACCACCCTCAAGATGCTCAACCTCTCATACAACCCTTTTTTCCCTGGTCGGATCCCTCCGGAGCTGGGGAACCTGACGAATCTCCGGGTCATGTGGCTCACGCAGTGTAACTTGGTCGGCGTGATTCCTGAGTCTTTCGGGAGGCTGAAGAAACTCAGGGACTTGGACCTGGCGTTGAACAATCTCTACGGTCCGATTCCCAGTTCCCTCATTGAGATGACGAGTTTGAAGCAGATTGAGCTGTATAACAACTCGTTGTCGGGCGAGTTACCTCGGGGAATGGGGAACCTCACGGCATTGAGGCTAGTCGACGTGTCCATGAACCATTTGAGTGGGACGATTCCGGACGAGTTGTGTCGGCTGCCGCTGGAAAGCCTTAACCTTTACCAGAATCAGTTCGAGGGTGGGTTGCCGGAGAGCATAGCCGAATCGCCCAATCTCTATGAACTGAGATTGTTTGGTAACAAACTCACCGGAAAACTGCCCAGTAATCTTGGGAAGAATGCTCCTATCAAGTGGCTTGATGTTTCTAGCAACCAGTTCTGGGGCGAAATTCCGGCGACTTTGTGTGACAATGGGAAATTGGAGGAGCTTTTGATGATATACAACTCGTTTTCCGGTGAGATCCCGGCGAGTTTGGGCAGTTGTCGGAGTTTGATGCGGGTCCGGCTCGGGTTCAACCGGTTGTCTGGGGAAGTCCCGGCGGCTATTTGGGGGCTTCCGCATGTCTATCTGCTTGAACTCATTGATAACTCATTTTCTGGTTCAATCGCCAAAACTATCGCCGGCGCTGGGAACCTGTCCTTGTTGATTTTATCGAAAAACAATTTCACGGGACCGATCCCTGATGAGGTTGGGTGGCTAGAAAACCTTGAGGAATTCTCTGGTAATGATAACATGTTCAATGGCTCGCTGCCTGCTAGCATAGTGAATCTTGGGCAGCTTGGGACCCTTGATCTTCATAACAATAAACTCTCAGGCGTGCTTCCAAAGGGAGTTCGATCCTGGAAGAAACTCAATGAGCTGAATCTGGCAAACAATGAGATTAGTGGAAGTATTCCTGAAGAGATTGGAAGTTTGTCCGTGCTAAATTTTCTAGATCTTTCAAATAATCAGTTGTCCGGTAAAGTTCCTCTTGGGTTGCAGAATTTGAAGCTCAATAAGTTGAATATGTCTTACAATCAACTCTCTGGAGAACTTCCTCCTTTGTTGGCTAAAAATATGTACGAGACTAGTTTTCTGGGTAATCCTGGTTTGTGTGGGGATTGGAACGGCTTGTGTAATGACAGAGATGAAGCTAAGGCTGCAGGTTATTCTTGGTTGCTCCGAACTATTTTCATCACTGCCACTGTTGTGTTTGTCGTGGGCGTGGTCTGGTTTTATTTCAAGTATAAGAACTTTAAGAAGGCTAAAAGAGCCATTGACAAATCAAAATGGACATTGATGTCATTCCATAAACTGGGCTTCAGTGAAGATGAAATTTTGAATTGCCTTGATGATGATAGTGTGATAGGAAGTGGATCATCTGGGAAAGTTTACAAGGTTGTTCTCGGCAATGGGGAGGCTGTGGCCGTGAAGAAGCTGTGGGGGGGCATGAAAAAGGATGCGGAGAGTGGGGATATTGAAAAAGATGGGGTTCAAGACAATGCATTTGATGCAGAAGTTGAAACTTTGGGTAAAATTAGGCACAAGAACATAGTCAAGCTTTGGTGTTGTTGCACCACCAGAGACTGCAAACTTCTGGTTTATGAGTACATGCCAAATGGTAGTCTAGGTGATTCACTTCATGGTAGTAAAGGAGGGTTGTTGGACTGGCCAACGAGGTATAAGATAGCCCTTGACGCTGCAGAAGGCCTCTCTTATCTGCATCATGACTGTGTTCCCCCAATTGTTCATAGAGATGTAAAATCCAACAATATCCTGTTGGATGGCGACTTTGGTGCAAGAGTGGCCGATTTTGGAGTAGCTAAGGTTGTTGAAACCAACGGGAAAGGAATCAAATCCATGTCTGTCATTGCTGGCTCTTGTGGATATATTGCACCAGAATACGCATACACGCTGAGGGTGAACGAGAAGAGTGACATATACAGTTTTGGTGTAGTGATCCTTGAGTTAGTGACCGGAAGACGGCCAGTGGACCCAGAGTTTGGAGAAAAGGACTTGGTGAAGTGGGTTTGCACCACCTTTGACCAGAAAGGAGTGGACCATGTCATTGACTCTAGGCTTGATTCTTGTTACAAAGAAGACATACGCAAGGTCCTCGACATTGGCCTCATGTGCACCAGTCCTCTTCCGATCAACCGCCCCGCCATGAGAAGGGTGGTCAAGATGCTGCAGGAGATGGGCTCAGAGAAGCCTATCAAGAAAGATGGAAAATTGTCACCTTATTACTGTGATGATGCCTCAGATCATGGAAGTGTAGCCTAA 2979 0.482 MLPLLLLLCFLFPPPSTLSLNQDGLYLYQFKLSVDDPESSLSSWNDRDAHPCSWSGVTCDSTNSSVIELNLSNSNIAGPFHASVLCRLTNLTSLTLFNNSINDTLPSEISLCRSLVHVDLSQNLLTGALPHSLSELPNLRYLDLTGNNFSGPIPDSFGQFQKLEVISLVYNLLDGTIPASLGNITTLKMLNLSYNPFFPGRIPPELGNLTNLRVMWLTQCNLVGVIPESFGRLKKLRDLDLALNNLYGPIPSSLIEMTSLKQIELYNNSLSGELPRGMGNLTALRLVDVSMNHLSGTIPDELCRLPLESLNLYQNQFEGGLPESIAESPNLYELRLFGNKLTGKLPSNLGKNAPIKWLDVSSNQFWGEIPATLCDNGKLEELLMIYNSFSGEIPASLGSCRSLMRVRLGFNRLSGEVPAAIWGLPHVYLLELIDNSFSGSIAKTIAGAGNLSLLILSKNNFTGPIPDEVGWLENLEEFSGNDNMFNGSLPASIVNLGQLGTLDLHNNKLSGVLPKGVRSWKKLNELNLANNEISGSIPEEIGSLSVLNFLDLSNNQLSGKVPLGLQNLKLNKLNMSYNQLSGELPPLLAKNMYETSFLGNPGLCGDWNGLCNDRDEAKAAGYSWLLRTIFITATVVFVVGVVWFYFKYKNFKKAKRAIDKSKWTLMSFHKLGFSEDEILNCLDDDSVIGSGSSGKVYKVVLGNGEAVAVKKLWGGMKKDAESGDIEKDGVQDNAFDAEVETLGKIRHKNIVKLWCCCTTRDCKLLVYEYMPNGSLGDSLHGSKGGLLDWPTRYKIALDAAEGLSYLHHDCVPPIVHRDVKSNNILLDGDFGARVADFGVAKVVETNGKGIKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRRPVDPEFGEKDLVKWVCTTFDQKGVDHVIDSRLDSCYKEDIRKVLDIGLMCTSPLPINRPAMRRVVKMLQEMGSEKPIKKDGKLSPYYCDDASDHGSVA 992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2746 992 FunFam Leucine-rich receptor-like protein kinase family protein 202 300 - -
Dere02g2746 992 FunFam Receptor-like protein kinase HSL1 666 769 - -
Dere02g2746 992 Pfam Leucine rich repeat N-terminal domain 21 60 IPR013210 -
Dere02g2746 992 SUPERFAMILY L domain-like 369 605 - -
Dere02g2746 992 Gene3D Transferase(Phosphotransferase) domain 1 770 979 - -
Dere02g2746 992 SUPERFAMILY Protein kinase-like (PK-like) 677 963 IPR011009 -
Dere02g2746 992 ProSitePatterns Protein kinases ATP-binding region signature. 688 711 IPR017441 GO:0005524
Dere02g2746 992 SMART LRR_typ_2 136 159 IPR003591 -
Dere02g2746 992 SMART LRR_typ_2 544 567 IPR003591 -
Dere02g2746 992 SMART LRR_typ_2 209 232 IPR003591 -
Dere02g2746 992 SMART LRR_typ_2 88 112 IPR003591 -
Dere02g2746 992 SMART LRR_typ_2 281 305 IPR003591 -
Dere02g2746 992 SMART LRR_typ_2 496 519 IPR003591 -
Dere02g2746 992 SMART LRR_typ_2 233 257 IPR003591 -
Dere02g2746 992 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 20 184 - -
Dere02g2746 992 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 229 964 - -
Dere02g2746 992 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 770 978 - -
Dere02g2746 992 Gene3D Phosphorylase Kinase; domain 1 666 769 - -
Dere02g2746 992 SMART serkin_6 682 981 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g2746 992 FunFam Receptor-like protein kinase HSL1 306 613 - -
Dere02g2746 992 ProSitePatterns Serine/Threonine protein kinases active-site signature. 814 826 IPR008271 GO:0004672|GO:0006468
Dere02g2746 992 Pfam Protein kinase domain 685 903 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g2746 992 Gene3D Ribonuclease Inhibitor 177 304 IPR032675 -
Dere02g2746 992 ProSiteProfiles Protein kinase domain profile. 682 981 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g2746 992 ProSiteProfiles Leucine-rich repeat profile. 522 544 IPR001611 GO:0005515
Dere02g2746 992 Gene3D Ribonuclease Inhibitor 307 614 IPR032675 -
Dere02g2746 992 SUPERFAMILY RNI-like 68 415 - -
Dere02g2746 992 Pfam Leucine rich repeat 113 149 IPR001611 GO:0005515
Dere02g2746 992 Pfam Leucine rich repeat 499 557 IPR001611 GO:0005515
Dere02g2746 992 Pfam Leucine rich repeat 211 270 IPR001611 GO:0005515
Dere02g2746 992 Gene3D Ribonuclease Inhibitor 20 176 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2746 Dere-ChrDere02 30905761 30909064 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2746 15 992 Receptor kinase-like Gene Family AT1G28440 69.838 0.0 1412
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Dere02g2746 Pkinase 3.6e-41 CL0016