Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2742 ATGGAGGCCGAGGTTGTTTCGGAGGGAGAGAATAATCAGAAAAGGGACGCCGCTGATGATTACAATGACAACAATAATGGTAGTAACAGCAAAATTGTTAATTCCAATGAAGGGCAGAGCAAGCCCAAGCGTCAGATGAAGACCCCCTTCCAGCTTGAAACCCTGGAGAAAGCTTATGCTTTGGAGACGTACCCATCGGAGGCGATGAGGGCGGAACTTTCGGAGAAGTTGGGGCTGTCGGATCGGCAATTGCAGATGTGGTTCTGCCATAGGAGGTTAAAAGACAAGAAGGACTTGCCGCCAAAGAAGTCGTCACGGAAGGCCGTGGCGCCGTTGCCCGATTCACCGACTGACGAGCTGAGGATGGGGACTGAACTTGCCAATGATTACGGATCCGGGTCGGGTTCGGGCTCAAGCCCATTTACACGTTCAGAGTTGCGGAATGTAGTACCTCGGGGAGTGCCGGGGTACTATGAGTCGCAGCAGTCTATAATGGAGCTCAGAGCAATTGCTTGTGTGGAGGCACAGTTAGGGGAGCCCTTGAGGGAGGACGGACCCATTCTAGGAATTGAGTTTGATCCATTGCCCCCGGATGCTTTTGGGGCACCTATAGTTACCGAGCAGCAGAAGCGGCCTAGTCTTGGCTTTGATAGTAAACCCTATGAAAGGCATGATGTTAGATCAAATAAGGTTATGGCAAGGACTTTCCATGAATATCCATTTCTTCCAAACCCCTCCAATATCAGATCTGATGCTTATGGACAATTGTCCCAATCTCATTTACATGATCCAGTGGATGGGCCTACCAGAACTCCATCTTTTGTGGTTAAAAATGAACAGCTACCCAGGATTCATGCTGCTCAGGGTCATTCTTCACGTGTTCGTCTTTCATCTCTACAAGAGAAGCAGGGGCTTTCCTATCCATCACCCCCTCATGATGATGATGTTCCCCCCCAAAGGGAATCTTACACAAACATAAATATTGGAATGAGTTCTCACTTGACTGATAGCCCATTTATTGGACCAGAAAACCCTTATGCTTTACCTGGTGGACAGGTTTTTCATAGCGATGCAATAGTGCGGATGGATAGGAAACGAAAGAGTGATGATTCTAGAACTGCAAGAGAAGCTGAAGCCCATGAGATGAGGATCCGGAAAGAGCTAGAGAAACAAGATAACCTTAGACGAAAGAGTGAGGAACGAATGAGGAAAGAGATGGAGAGGCAAGATCGTGAAAGAAGGAAGGAAGAAGAGAGGTTGATGCGTGAGAAACAGAGAGAAGAAGAAAGAACAAAGCGTGAGCAAAGACGTGAAATCGAACGTAGGGAGAAGTTTCTGATGAAAGAAAACTTGAGAGCTGAGAAAAGGAGGCAAAAGGAAGAGCTTCGAAAGGAGAAAGAAGCAGAGAGAAGGAAAGCTGCCCTTGAGAAGGCAGTTGCTCGCAGAATAGCTAAAGAATCTATGGAGCTTATTGAGGATGAACAATTGGAATTGATGGAGTTGGCTGTGTCAAGCAAGGGACTTTCTTCGATTATAAATCTTGATCTTGACACTTTGCAAAACCTTGATATGTTCCGTGATTCTTTGTGTGTTTTTCCACCTAAGAGTGTAAAGCTGAGAAAAGCATTTGCCATCCAACCCTGGATCAAATCTGAGGAGAATGTTGGCAACCTTCTCATGGTTTGGCGATTTTTGATTACTTTTGCAGATGTGCTCGAGTTATGGCCTTTTACTCTTGATGAATTTTTGCAGGCATTTTATGATTATGATTCGAGGTTGTTGGGCGAGATACATGTTGCTCTTCTCAAGGTGATAATAAAAGACATTGAAGATGTTGCAAGGACACCTACGGGATTAGGTATGAACCAGAATGGTGCTGCTAATCCTGGGGGTGGCCATCCAGAGATTGTGGAAGGGGCATATGCATGGGGCTTTGATATACGAAATTGGCAGAAGCACTTGAATCAATCAACATGGCCAGAAATTTTCCGACAGTTAGCATTGTCTGCAGGGTTTGGACCACGGCTGAAGAAAAGAAGTATCACTTGGTCATATGCAAATGATAAAGATGAGCAGGGTAGAAGTTGTGAAGACATCATTTCCACACTTCGCAATGGTTCAGCAGCTGAAAATGCTGTGGCAAAAATGCAAGAGAAAGGTCTATTAGCCCCTCGGAGATCAAGGCATCGGTTGACTCCTGGAACAGTCAAGTTTGCAGCATTTCATGTTCTGTCTCTTGAGGGTAGCAAGGGGTTGACAGTATTAGAGCTTGCAGAGAAAATTCAGAAATCTGGACTTCGGGACCTGACGACTAGCAAGACACCTGAGGCATCAATTTCTGTTGCTTTGACTAGAGATGCTAAGCTTTTTGAAAGAATAGCTCCCTCAACATATCGTGTACGAGCTGCATACAGAAAGGATCCTGCTGATGCTGAGGCCATTCTTTCAGATGCTAGAAAGAAAATTCAGATATTTGAAAATGGGTTTCCGGCTGTTGAAGATGCTGATGATGTTGAAAGAGAAGAAGAGTCGGAAAGTGATGAAGTTGATGAGGATCCTGAAGTCGACGATTTAGTAAATCCTCCAAGTGATAACAAAACCTCTGAACAGTATGATAACATGAATAACTGCTCTACAAATGGAAGAGAAAATTTAAGCCATGACATAGAGCTAATACAAAATGAGTTTGATAAGGATCTACCCTGTGTTCCTGAGAATGGTTCCAAGAATGCTGATTGTCCAAGTGCTATCACCGGACAACAGGTTGCTGTTGAAGATTTGAATGCTGGAAGTCTTGATGAAGATAATATGGAAATTGATGAAAGCAGGTCTGGAGAGTCATGGGTTCAAGGTCTTACAGAAGGAGAATATTCTGACCTCAGTGTGGAGGAACGTCTTAATGCTCTTGTTGCATTAGTTGGTGTGGCAAATGAAGGAAATTCAATACGTGTTGTTCTTGAGGACCGTTTGGAAGCAGCAAATGCTCTGAAGAAGCAAATGTGGGCAGAAGCACAGATCGATAAAGTTCGACTAAAAGATGATAATGTTAATAAATCAGAATTTCCATCTCTTGTTGCAAATAAAGTTGATACACAATATACAGGTCCTGCTACAGAGGGAAACCAGAGCCCATTGCTTGACATTAATATTAATAATATTGAGGCATCGCCCAGCACTGCAGAAAACCAAAAAGAAGTTCTCGGTGCACAGAGCATGCCTGTTGAAAAGCCTTCAGTTGTTCAAGATCTTTTCATTGGTTTGGATAACCCTCAAATTCTATCTGCACATGCTTCAAAAAGGTCTCGTTCACAGTTGAAGTCTTATATTGCCCATATAGCAGAAGAGATGTATGTATATAGGTCATTGCCCCTGGGTCAAGATCGGAGACGTAACCGATATTGGCAATTTGTTGCATCTGCTTCATGCAGTGATCCTGGTTCTGGCAGGGTCTTTGTTGAATTACATGATGGCAATTGGAGGCTTATTGATTCTGAAGAGGCCTTTGATGCACTTTTGACATCACTTGATTCTCGTGGAACTAGAGAATCTCATTTGCGCTTAATGCTGCTGAAGATTGAGAATTCCTTTAAGGAAAATGTTAGAAAGAATGCACAATTAAATAAAATTGCAACCAGAGTAGAACATTCAATTAAAAATGAAGCTGATGAAGTAGAACCCATGCCTGATTGCCGTGCTGGATCTGACAGTTCTTGCAGTACTCTGTGTGGTTTGAATTCTGATGGTGCATTGGAATATTCGTCATCCTTCAAAATTGAGCTTGGTAAAAGTGAGAGTGAAAAGAAAGCTTCCTTGAGAAAGTATCAAGATGTTCAAAAGTGGTTATGGAAAGAATGTTATAATTCATCAACATTATGTGCAATGAAATACGGGCAAAAGAGATGCAAACCACTGGTGGAAATATGTGATATGTGTTTGAACCCATACTTCTTTGAAGACTCCCATTGTAGTTCTTGCCACCGTACTTTTTCTGCTAATAATGGATTTAATTTTTCTAAACATGCATTTCAATGTAGAGAGAAGTTAGACACTAAAAATATTTGTATTTGGGATTCTGCTCTTCCCTTGCGGATAAGATTGCTCAAGGCCCTATTGGCTTGTATTGAGGCATCTGTCCCTCTTGAAGCATTACAATCTTTTTGGACAGAAGAGAACAGGAAGCAGTGGGGTGTAAAGTTGAGCAGATCATCTACGGTTGATGAACTTTTGCAGTTATTGACCTTGTTTGAGAGAGCATTACAGCGAGACTTTCTGTCATCAAACTTTTCTACAACAGAGGAAATGTTGGGATCAAGCAGTATGCCAGAGAGTGCTGTAGATGCTTCAACTCATACTGAATCAGTTCCTGTGCTTCCATGGGTACCGCAAACCACTGCAGCTGTGTCTTTGAGACTTTTTGAGTTTGATGCGTCCATCAGTTACACACAACTTGAGAAACCTGAGCCACCTTGTGAAGAGAGAGAAGTGGAGGAATACTTAAAGCTTCCTTCAAGATATGCTCCCTTCAAATCTGCTAGAGCTATTGAATCAGCAGAATTAGACCATGATGAATTCATTAAGGAAGACAAATCTGCCCACAATAAAAGTGTTCGAAGCAGCAATAAACGTGGACGAGGGTCTCAGGACCAAGGACGGGGCAAAAAGGTGTCTAGAAGAACGCATGAGCCAAAACAACATCCCGGGCGTCGTAATGTCAAGAGTAGTGTGAATTTCGGTCAAGTAATAAAACAGCAGGGACGAGGGACACAAGGGCAACCCGGTGGACGTGGTCGCCGAACGGTCAGGAAAAGGAGAGTGGAAAAGAGGGCTGTTGAGGATTTGTTGTTGGGTCACAAAGCTGTCAGTCATAGTCCCAAGATTGGTAGGGAGTCATTGAGAAGTTTGGAAGAGGAATGGGATGGTGAAAAGGAGGCAAGTCCCATCCAAATAGAGGGTGGTGATAATAGTAACAGTGCCGAGGAAGTGGAATCTGATGACAATGGGCAAGCAGTGGAATATGAGCAAGGAAACTGGGAGGTAGGTTTTAATGGTGGTGGTAGCTCCAATAGATGGGGTAGGGATTTAGTTGGAGTGAGTGATGAAGAAGTGGTGGGTGCTTCTGAAGATGACAATGGCACTGAAGAGGGAGAGGAGGAATTGGAGGATTCAGAGGATGATGTTATGAGTGAGGGTGAGGGGTCAGATGGTATGGCAAATAGAATGATAGTAAATGAAGAAGGCTCAGACTCAGCTGTCTCTGAAGATTCTTCTGATTAG 5274 0.4342 MEAEVVSEGENNQKRDAADDYNDNNNGSNSKIVNSNEGQSKPKRQMKTPFQLETLEKAYALETYPSEAMRAELSEKLGLSDRQLQMWFCHRRLKDKKDLPPKKSSRKAVAPLPDSPTDELRMGTELANDYGSGSGSGSSPFTRSELRNVVPRGVPGYYESQQSIMELRAIACVEAQLGEPLREDGPILGIEFDPLPPDAFGAPIVTEQQKRPSLGFDSKPYERHDVRSNKVMARTFHEYPFLPNPSNIRSDAYGQLSQSHLHDPVDGPTRTPSFVVKNEQLPRIHAAQGHSSRVRLSSLQEKQGLSYPSPPHDDDVPPQRESYTNINIGMSSHLTDSPFIGPENPYALPGGQVFHSDAIVRMDRKRKSDDSRTAREAEAHEMRIRKELEKQDNLRRKSEERMRKEMERQDRERRKEEERLMREKQREEERTKREQRREIERREKFLMKENLRAEKRRQKEELRKEKEAERRKAALEKAVARRIAKESMELIEDEQLELMELAVSSKGLSSIINLDLDTLQNLDMFRDSLCVFPPKSVKLRKAFAIQPWIKSEENVGNLLMVWRFLITFADVLELWPFTLDEFLQAFYDYDSRLLGEIHVALLKVIIKDIEDVARTPTGLGMNQNGAANPGGGHPEIVEGAYAWGFDIRNWQKHLNQSTWPEIFRQLALSAGFGPRLKKRSITWSYANDKDEQGRSCEDIISTLRNGSAAENAVAKMQEKGLLAPRRSRHRLTPGTVKFAAFHVLSLEGSKGLTVLELAEKIQKSGLRDLTTSKTPEASISVALTRDAKLFERIAPSTYRVRAAYRKDPADAEAILSDARKKIQIFENGFPAVEDADDVEREEESESDEVDEDPEVDDLVNPPSDNKTSEQYDNMNNCSTNGRENLSHDIELIQNEFDKDLPCVPENGSKNADCPSAITGQQVAVEDLNAGSLDEDNMEIDESRSGESWVQGLTEGEYSDLSVEERLNALVALVGVANEGNSIRVVLEDRLEAANALKKQMWAEAQIDKVRLKDDNVNKSEFPSLVANKVDTQYTGPATEGNQSPLLDININNIEASPSTAENQKEVLGAQSMPVEKPSVVQDLFIGLDNPQILSAHASKRSRSQLKSYIAHIAEEMYVYRSLPLGQDRRRNRYWQFVASASCSDPGSGRVFVELHDGNWRLIDSEEAFDALLTSLDSRGTRESHLRLMLLKIENSFKENVRKNAQLNKIATRVEHSIKNEADEVEPMPDCRAGSDSSCSTLCGLNSDGALEYSSSFKIELGKSESEKKASLRKYQDVQKWLWKECYNSSTLCAMKYGQKRCKPLVEICDMCLNPYFFEDSHCSSCHRTFSANNGFNFSKHAFQCREKLDTKNICIWDSALPLRIRLLKALLACIEASVPLEALQSFWTEENRKQWGVKLSRSSTVDELLQLLTLFERALQRDFLSSNFSTTEEMLGSSSMPESAVDASTHTESVPVLPWVPQTTAAVSLRLFEFDASISYTQLEKPEPPCEEREVEEYLKLPSRYAPFKSARAIESAELDHDEFIKEDKSAHNKSVRSSNKRGRGSQDQGRGKKVSRRTHEPKQHPGRRNVKSSVNFGQVIKQQGRGTQGQPGGRGRRTVRKRRVEKRAVEDLLLGHKAVSHSPKIGRESLRSLEEEWDGEKEASPIQIEGGDNSNSAEEVESDDNGQAVEYEQGNWEVGFNGGGSSNRWGRDLVGVSDEEVVGASEDDNGTEEGEEELEDSEDDVMSEGEGSDGMANRMIVNEEGSDSAVSEDSSD 1757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2742 1757 MobiDBLite consensus disorder prediction 363 436 - -
Dere02g2742 1757 MobiDBLite consensus disorder prediction 1525 1757 - -
Dere02g2742 1757 ProSiteProfiles 'Homeobox' domain profile. 38 98 IPR001356 GO:0003677
Dere02g2742 1757 MobiDBLite consensus disorder prediction 1622 1646 - -
Dere02g2742 1757 ProSiteProfiles DDT domain profile. 552 611 IPR018501 -
Dere02g2742 1757 Gene3D - 25 99 - -
Dere02g2742 1757 MobiDBLite consensus disorder prediction 286 323 - -
Dere02g2742 1757 CDD homeodomain 43 92 IPR001356 GO:0003677
Dere02g2742 1757 MobiDBLite consensus disorder prediction 97 144 - -
Dere02g2742 1757 Pfam HB1, ASXL, restriction endonuclease HTH domain 734 802 IPR007759 GO:0006355
Dere02g2742 1757 SUPERFAMILY Homeodomain-like 28 97 IPR009057 -
Dere02g2742 1757 Coils Coil 377 479 - -
Dere02g2742 1757 SMART testlast3 552 611 IPR018501 -
Dere02g2742 1757 SMART HOX_1 40 102 IPR001356 GO:0003677
Dere02g2742 1757 MobiDBLite consensus disorder prediction 1702 1730 - -
Dere02g2742 1757 MobiDBLite consensus disorder prediction 291 305 - -
Dere02g2742 1757 MobiDBLite consensus disorder prediction 1569 1590 - -
Dere02g2742 1757 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 26 1757 IPR044977 GO:0006357
Dere02g2742 1757 MobiDBLite consensus disorder prediction 1 51 - -
Dere02g2742 1757 Pfam Homeodomain 41 97 IPR001356 GO:0003677
Dere02g2742 1757 MobiDBLite consensus disorder prediction 7 21 - -
Dere02g2742 1757 Pfam DDT domain 553 608 IPR018501 -
Dere02g2742 1757 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 1120 1192 IPR028941 -
Dere02g2742 1757 MobiDBLite consensus disorder prediction 830 872 - -
Dere02g2742 1757 MobiDBLite consensus disorder prediction 835 858 - -
Dere02g2742 1757 MobiDBLite consensus disorder prediction 129 144 - -
Dere02g2742 1757 ProSiteProfiles HARE-type HTH domain profile. 734 803 IPR007759 GO:0006355
Dere02g2742 1757 MobiDBLite consensus disorder prediction 22 47 - -
Dere02g2742 1757 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 944 987 IPR028942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2742 Dere-ChrDere02 30821758 30830825 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2742 4 1682 Homeobox Transcription Factor Family AT1G28420 50.000 0.0 1377
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Dere02g2742 WSD 7.6e-14 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere02g2742 02 30821758 30830825 Dere02g2742 02 30821758 30830825 CCT
Dere02g2742 02 30821758 30830825 Dere02g2742 02 30821758 30830825 ECH