Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2741 ATGGGTGTGGACTACTATAAGGTTCTGCAGGTTGACAAGAATGCCACTGATGAAGATTTGAAGAAAGCTTATAGAAAGCTTGCCATGAAATGGCACCCTGATAAGAACCCAAACAACAAGAAAGAGGCTGAGGCCAACTTTAAACAGGTCTCCGAAGCATACGAGGTTCTAAGTGATCCCCAGAAGAGAGCAATTTATGATCAGTATGGAGAAGAAGGGCTTAAAGGGCAGGTGCCACCTCCTGATGCTGGTGGGGCTTCATTCTTCCATACTGGAAATGGTTCATCGACGTTTAGGTTTAACCCCAGAAATGCAAACGACATTTTTGCTGAATTCTTTGGGTTTTCAAGCCCATTTGGAGGAATGGGGGGTGGTGATGGCATGAGGGGTGGTTCAAGGTCCTTTGGTATGTTTGGGGATGACATATTCAGTTCATTTGGAGAAAGCAGGCCTATGAGTCAGGGTCCACGCAAGGCCCCCCCTATTGAAAACAGATTGCCTTGCAGCCTCGAGGAGCTCTATAAGGGGACTGTCAAGAAGATGAAGATCTCAAGGGAACTTTTAGATGCAAGCGGAAAAACTTTACCAGTGGAGGAAATCTTAACCATTGAAATCAAACCCGGCTGGAAAAAGGGAACGAAGATCACCTTCCCAGAGAAAGGAAACGAACAACCCAATGTGATTCCTGCAGATCTGGTTTTCATTATTGATGAGAAACCCCACAGTGTATTTACCAGGGATGGCAATGATCTGTTAGTGACACAGAAAATATCACTTGCAGAAGCTCTAACAGGCTACACTGTCCATCTTACTACTCTGGATGGTAGGACTCTGACCATTCCCATAACCAACGTAATACATCCATCCTATGAAGAGGTTGTCCCAAAGGAAGGTATGCCAATTCCCAAAGAGCCGTCAAAGAGGGGTAACCTTAGGATTAAGTTCATCATCAGATTCCCAGCAAGGTTGACATCGGAGCAGAAAGCTGGAATTAAGAAACTCTTGGGGCCATGA 1014 0.4527 MGVDYYKVLQVDKNATDEDLKKAYRKLAMKWHPDKNPNNKKEAEANFKQVSEAYEVLSDPQKRAIYDQYGEEGLKGQVPPPDAGGASFFHTGNGSSTFRFNPRNANDIFAEFFGFSSPFGGMGGGDGMRGGSRSFGMFGDDIFSSFGESRPMSQGPRKAPPIENRLPCSLEELYKGTVKKMKISRELLDASGKTLPVEEILTIEIKPGWKKGTKITFPEKGNEQPNVIPADLVFIIDEKPHSVFTRDGNDLLVTQKISLAEALTGYTVHLTTLDGRTLTIPITNVIHPSYEEVVPKEGMPIPKEPSKRGNLRIKFIIRFPARLTSEQKAGIKKLLGP 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2741 337 SUPERFAMILY HSP40/DnaJ peptide-binding domain 156 247 IPR008971 GO:0006457|GO:0051082
Dere02g2741 337 Pfam DnaJ domain 4 67 IPR001623 -
Dere02g2741 337 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Dere02g2741 337 CDD DnaJ 4 59 IPR001623 -
Dere02g2741 337 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Dere02g2741 337 FunFam Dnaj homolog subfamily b member 158 239 - -
Dere02g2741 337 CDD DnaJ_C 160 323 - -
Dere02g2741 337 FunFam DnaJ subfamily B member 13 3 123 - -
Dere02g2741 337 Gene3D DnaJ domain 3 123 IPR036869 -
Dere02g2741 337 PRINTS DnaJ domain signature 42 62 IPR001623 -
Dere02g2741 337 PRINTS DnaJ domain signature 62 81 IPR001623 -
Dere02g2741 337 PRINTS DnaJ domain signature 6 24 IPR001623 -
Dere02g2741 337 PRINTS DnaJ domain signature 24 39 IPR001623 -
Dere02g2741 337 Gene3D - 161 239 - -
Dere02g2741 337 SMART dnaj_3 3 62 IPR001623 -
Dere02g2741 337 FunFam DnaJ subfamily B member 13 241 321 - -
Dere02g2741 337 SUPERFAMILY HSP40/DnaJ peptide-binding domain 243 329 IPR008971 GO:0006457|GO:0051082
Dere02g2741 337 Pfam DnaJ C terminal domain 162 320 IPR002939 -
Dere02g2741 337 Gene3D - 241 320 - -
Dere02g2741 337 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 335 - -
Dere02g2741 337 SUPERFAMILY Chaperone J-domain 3 113 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2741 Dere-ChrDere02 30818354 30820297 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2741 5 69 C2H2 Transcription Factor Family AT1G74250 40.580 9.38e-10 58.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere02g2741 02 30818354 30820297 Dere02g2741 02 30818354 30820297 ECH