Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2698 ATGGCTTCTTCATCTTCGCCTCCTTCTTCCACGTCGCGTGAGGGTCACTACAGAGGGGTGAGAAAGCGACCATGGGGTCGATATGCCGCGGAGATTCGCGATCCGTGGAAGAAAACGCGAGTTTGGTTGGGTACATTTGACACTCCTGAAGAGGCGGCACTTGCCTACGACGGTGCCGCTCGTTCCCTGCGTGGACCCAAAGCCAAAACCAACTTTCCTCCGGCCCCGGTGGCCGCTGGAGGTCTCTGCCTTGACCTCAACGTCCCGAACTCCGATCATCGCTGGTCTCCCATTCCCTCCGGTCGCCTTGTGCTCAATGAGCTCCTCCACGCGGGTGTTCTCAAGGACATGAGCTTTGATCCTCCTCCTCCTGCCGCGTCCATTGCTATGGTTCACAACCGGCGTGATGGCTCTGTCCCCGTAGGCGGCGGTCATCATCAGGTGCCGGAGAGCTCTCCAACGGCGTCGTTTCTTGGACTTGTTCGGCGAGGCCTGCCGATTGACCTGAACGAGCCTCCTCCCTTGTGGCTATGA 534 0.5936 MASSSSPPSSTSREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGPKAKTNFPPAPVAAGGLCLDLNVPNSDHRWSPIPSGRLVLNELLHAGVLKDMSFDPPPPAASIAMVHNRRDGSVPVGGGHHQVPESSPTASFLGLVRRGLPIDLNEPPPLWL 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2698 177 Pfam AP2 domain 16 65 IPR001471 GO:0003700|GO:0006355
Dere02g2698 177 FunFam Ethylene-responsive transcription factor 2 16 74 - -
Dere02g2698 177 MobiDBLite consensus disorder prediction 1 20 - -
Dere02g2698 177 SUPERFAMILY DNA-binding domain 16 73 IPR016177 GO:0003677
Dere02g2698 177 SMART rav1_2 16 79 IPR001471 GO:0003700|GO:0006355
Dere02g2698 177 CDD AP2 16 75 IPR001471 GO:0003700|GO:0006355
Dere02g2698 177 Gene3D AP2/ERF domain 16 74 IPR036955 GO:0003700|GO:0006355
Dere02g2698 177 PRINTS Ethylene responsive element binding protein signature 39 55 IPR001471 GO:0003700|GO:0006355
Dere02g2698 177 PRINTS Ethylene responsive element binding protein signature 17 28 IPR001471 GO:0003700|GO:0006355
Dere02g2698 177 ProSiteProfiles AP2/ERF domain profile. 16 73 IPR001471 GO:0003700|GO:0006355
Dere02g2698 177 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 11 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2698 Dere-ChrDere02 30388927 30389460 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2698 9 177 AP2-EREBP Transcription Factor Family AT1G28360 48.718 5.15e-43 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Dere02g2698 AP2 1.6e-14 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere02g2698 02 30388927 30389460 Dere02g2698 02 30388927 30389460 ECH