Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2677 ATGGTCGGAGTTTTGGAAGTCGGGGCCGTTCCATTTAATCCCGATGGATGGGGCCCACCGGACGCCACAACCGCCACTTCCACCAACAATCTCCCTCTGAATGTCCCCTTCGCCCCCTTCTCCCGCTCCGATAAACTGGGTCGGATCGCCGATTGGACCCGCAACGTTAACAACCTGAGTCGACCCAAGAACCCCGCCGATTCTGTCTTCGACTTCACCAACGACGATTCCTTTCCTGCCTCCGCCGATGACGACTCGACCTTCCGTCTCGTTGACGGCAAGCCCCCTCCGAGACCCAAATTTGGCCCCAGATGGCGGTTCCAGCAGCAACGCCAGCTCCCTCAGCGCCGTGACGAAGAGGTCGAGGCTCGAAAACGCGAGGCCGAGAAGGAGAGGGCACGCCGTGACCGTCTCTACAATCTCAACAGATCCAACGCCCATAATACCCGTCGTGAAGCTGCCGTTTACAAATCTTCTGTGGATATTCAGCCCGATTGGAATATGCTGGACCAGATTCCATTCTCAACCTTCTCGAAGCTCTCCTTCAACGTTCCGGAACCCGAAGACCTTCTACTCTGTGGTGGGCTCGAGTATTACGATAGGTCTTATGATCGAATTACTCCGAAGAACGAACGTCGTCTTGAAAGGTTTAAGAACAGGAACTTTTTCAAGGTCACTACCACTGATGATCCAGTGATTCGGAGGCTTGCTAACGAGGATAAAGCAACTGTTTTTGCTACTGATACAATACTTTCGACGCTTATGTGTGCGCCCAGGTCTGTTTACTCTTGGGATATTGTTGTTCAGCGAGTTGGGAATAAGTTATTCTTCGATAAGAGAGATGGGTCGCAGTTAGATTTGCTTTCGGTGCACGAGACCTCACAGGAGCCGTTGCCCGAGGCAAAGGATGATATTAACTCAGCCCATTCATTGAGTGTTGAGGCAGCATATATCAATCAGAATTTTTCGCAACAAGTTTTGGTCAGACATGGTGATAAGCTGACGTTTGATGAGCCAAATCCTTTTGCAAATGAGGGTGAAGAGGTTGCTTCTGTGGCATATCGGTATAGGAGGTGGAAGCTTGATGACGATATGTATCTTGTTGCAAGGTGTGAAGTTCACAGTGTAGTTGATATGAACAACCAAAGGTCCTTCCTTACTTTGAATGCATTAAATGAATTTGATCCCAAATATTCAGGCGTTGATTGGAGGCAGAAGTTGGAGACACAGAGGGGTGCAGTCTTGGCCACAGAGCTTAAGAATAATGCAAATAAGTTGGCTAAATGGACTGCCCAAGCTCTGTTGGGAAGGGCAGACATGATGAAGTTGGGATATGTATCACGGGTTCATCCCCGTGATCATTTTAATCATGTAATTTTGGCTGTGGTTGGATATAAACCCAAGGACTTTGCTGCGCAAATTAACTTGAACACAGCTAACATGTGGGGAATTGTGAAGTCTATTGTGGACTTGTGCATGAAATTGAATGAGGGAAAGTATGTTCTGGTGAAGGATCCGTCGAAACCCCAAGTTAGGATCTATGAGGTTCCTGTAGATGCTTTTGAAAATGATTATGTGGAAGAGCCACTACCTGAAGAAGAACAAGTTCAACCTCCGACAGAGGGTGCTGCAGATGGTGGGGAGGCAACTGCTGCTACAAATGATGTGGAAGATAAGCAGATTGATGGTCAAGCTTGA 1698 0.4817 MVGVLEVGAVPFNPDGWGPPDATTATSTNNLPLNVPFAPFSRSDKLGRIADWTRNVNNLSRPKNPADSVFDFTNDDSFPASADDDSTFRLVDGKPPPRPKFGPRWRFQQQRQLPQRRDEEVEARKREAEKERARRDRLYNLNRSNAHNTRREAAVYKSSVDIQPDWNMLDQIPFSTFSKLSFNVPEPEDLLLCGGLEYYDRSYDRITPKNERRLERFKNRNFFKVTTTDDPVIRRLANEDKATVFATDTILSTLMCAPRSVYSWDIVVQRVGNKLFFDKRDGSQLDLLSVHETSQEPLPEAKDDINSAHSLSVEAAYINQNFSQQVLVRHGDKLTFDEPNPFANEGEEVASVAYRYRRWKLDDDMYLVARCEVHSVVDMNNQRSFLTLNALNEFDPKYSGVDWRQKLETQRGAVLATELKNNANKLAKWTAQALLGRADMMKLGYVSRVHPRDHFNHVILAVVGYKPKDFAAQINLNTANMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPVDAFENDYVEEPLPEEEQVQPPTEGAADGGEATAATNDVEDKQIDGQA 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2677 565 MobiDBLite consensus disorder prediction 81 134 - -
Dere02g2677 565 PIRSF Transl_init_eIF3d 2 545 IPR007783 GO:0003743|GO:0005737|GO:0005852
Dere02g2677 565 Pfam Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) 9 515 IPR007783 GO:0003743|GO:0005737|GO:0005852
Dere02g2677 565 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 7 6 538 IPR007783 GO:0003743|GO:0005737|GO:0005852
Dere02g2677 565 Coils Coil 116 136 - -
Dere02g2677 565 Hamap Eukaryotic translation initiation factor 3 subunit D [EIF3D]. 3 527 IPR007783 GO:0003743|GO:0005737|GO:0005852
Dere02g2677 565 MobiDBLite consensus disorder prediction 111 134 - -
Dere02g2677 565 MobiDBLite consensus disorder prediction 526 565 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2677 Dere-ChrDere02 30059780 30061477 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2677 4 562 Eukaryotic Initiation Factors Gene Family AT4G20980 78.596 0.0 920