Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2675 ATGCTGAACATAACTAACTGTGCTAGTTCATCCAGAAGCGATAGAAAATTCGTAGAGAGAAACCGAAGAAACCAAATGAAGGCCCTTTATACCAAGCTCAATTCGCTCGTCCCTCATCAATCTTCAAAGGAGATGATTCCACTGCCGGATCAGCTAGATGAAGCCTCCAACTACATAAAGAAGCTTCAGATGAAGTTGGAGAAGATGAAGGAGAAGAAACTCAGCCTTCTGGGAGTCGACAATAAGCCCTTTAATGAGAGCCAGCAAATTCATAATAGAGCGATGATTATGGGGTTAAAATCACCCCAAATGGAGACCCACCATATGGGTTCCGCATTAGAGGTTTCTGTAATTACTGGGTTGGATTGCCAGTTTATTTTCACTGAGATCGTTCGCATTCTTCATGAAGAAGCAGCAGATATTGTTAATGCCAGTTATTCAGTCGTTGAAGATGCTGTTTTTCATACCATACACTGTCAGGTAGAGGAATCTAGTAACAGAGCTGAGAGGATATCAGAGAGATTGAAGAGGTTTTTGTACGGTTCTGGTGCATAA 555 0.418 MLNITNCASSSRSDRKFVERNRRNQMKALYTKLNSLVPHQSSKEMIPLPDQLDEASNYIKKLQMKLEKMKEKKLSLLGVDNKPFNESQQIHNRAMIMGLKSPQMETHHMGSALEVSVITGLDCQFIFTEIVRILHEEAADIVNASYSVVEDAVFHTIHCQVEESSNRAERISERLKRFLYGSGA 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2675 184 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 10 62 IPR011598 GO:0046983
Dere02g2675 184 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 10 179 - -
Dere02g2675 184 FunFam Transcription factor bHLH162 4 88 - -
Dere02g2675 184 Gene3D - 5 93 IPR036638 GO:0046983
Dere02g2675 184 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 10 76 IPR036638 GO:0046983
Dere02g2675 184 Pfam Helix-loop-helix DNA-binding domain 13 63 IPR011598 GO:0046983
Dere02g2675 184 Coils Coil 52 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2675 Dere-ChrDere02 30034237 30045303 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2675 5 179 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 44.751 1.63e-45 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Dere02g2675 HLH 2.8e-06 No_clan