Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2674 ATGATGGAGAACAAGCCTGCTAGTTCATCCAGAACCGACAGAAAATTCATAGAGAGGAACAGAAGAAACCAAATGAAAGCTCTTTACTCCAAGCTCAATTCGCTCGTCCCTCGTCAATCATCAAGGGAGGTGATTCCACTGCCGGATCAGATAGATGAAGCCACGAGCTACATAAAGAAGCTTCAGATGAAGTTGGAGAAGATGAACGAGAAGAAACACAGCCTCATGGCAATTGATAATATGCCTAATAATGTGAGCCTAACTAATGACACAAGAAGAATTATGGGGTTGAAATCACCCCAGATTGAGATCCACCATATAGATTCTGCATTACAGGTTTCTGTTATTACTGGGTTGGATTGCCAGTTCATTTTCAGTGAGATCATTCGCATTCTTCATGAAGAAGCAGCAGATATTGTTACTGTCAGTTATAGAGTCGTTGAAGACGCTGTTTTTCATACCATACACTGTCAGGTAGGTGAATCTGCTAACGGAGCTGTGAGGATATCGGAGAGATTAAAGAGGTTTTTGTATGGTTCTGATGCATTTTAA 552 0.4112 MMENKPASSSRTDRKFIERNRRNQMKALYSKLNSLVPRQSSREVIPLPDQIDEATSYIKKLQMKLEKMNEKKHSLMAIDNMPNNVSLTNDTRRIMGLKSPQIEIHHIDSALQVSVITGLDCQFIFSEIIRILHEEAADIVTVSYRVVEDAVFHTIHCQVGESANGAVRISERLKRFLYGSDAF 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2674 183 FunFam Transcription factor bHLH162 2 87 - -
Dere02g2674 183 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 9 75 IPR036638 GO:0046983
Dere02g2674 183 Gene3D - 2 87 IPR036638 GO:0046983
Dere02g2674 183 Pfam Helix-loop-helix DNA-binding domain 11 62 IPR011598 GO:0046983
Dere02g2674 183 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 9 61 IPR011598 GO:0046983
Dere02g2674 183 Coils Coil 51 78 - -
Dere02g2674 183 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 10 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2674 Dere-ChrDere02 30007342 30008131 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2674 7 177 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 44.382 5.41e-42 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Dere02g2674 HLH 4.6e-05 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere02g2674 02 30007342 30008131 Dere02g2674 02 30007342 30008131 CCT