Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2671 ATGGAGGAAGATACCAGTTCTTGGATAAGGAGGACGAAATTCTCTCATACTGTGTGCCACCGATTGGACCCTTCGAGATTGGCCTCGATTCCTCTCCGCATTGAGCCAAGCCATTCAGGTCTCAAATCAAGGCCTTTGTCAGTTTCTTTCAATCTGAAGGAGGTCTCTGATGCTCCAAAGATACATCAAAATCCTAATGTAAAAAAGCCAAGATCTGTTTCCCCTGTGCCGGAAACCTCTCTTTCTGAGACCTTCAGAGAAGCTAGGTCTGAACGAAAGAGGTTTTCAACCCCAGGTCCTCGGAGAAAAGAACATCATGATAAGAGAATCATGGGGAAGTTATTGAATAAGGATTCTCGAGAGGTCAAAGCATCCAACTCGAAATCGCCAGCGCGAAGTCCGATCAGGCACATGCCAAGTATGAAATCGAACGATAACGGGAAGAATCGGAAGGAATCGGCGTGGACGAAGTATTTTGACCATGGCGGAGGAAGAGTTACTGCTGTGGAAACTGCAGAAGAATGGACAGTTGACCTCTCTAAGCTCTTTCTTGGGCTTAGGTTCGCTCATGGGGCTCATAGCCGACTCTACCGTGGTAATTATAAGGATGAACCTGTTGCTGTGAAACTTATAAGGGTACCAGATGATGATGAAAGCGGAACCATGGCTGGTCGATTAGAAAAACAGTTCATTAGAGAAGTCACACTTTTATCTCGTCTCCACCATCCAAATGTTATAAAGTTTGTAGCAGCTTGTAGAAAACCGCCTGTTTATTGTGTCATCACAGAATTTCTGTCAGAAGGTTCCTTGAGGGCATACTTACATAAGTTAGAGCGCAAAACTGTTCCTCTGGAAAAGCTTATAGCTTATGCTCTGGATATTGCTCGTGGAATGGAATATATACACTCTCAAGGTATCATTCATCGGGACCTTAAGCCAGAGAATGTGCTTATCAATGAAGAGTCCCACCTCAAAATTGCTGATTTTGGCATCGCTTGTGAGGAGGCATATCGTGATGTATTTACTGATGACCCTGGTACATACCGTTGGATGGCACCTGAGATGATCAAACGTAAATCCTATGGGAGAAAGGTCGATGTGTACAGTTTTGGGCTCATCCTGTGGGAAATGGTCACCGGAACAATCCCATATGAGGATATGACTCCCATCCAGGCTGCTTATGCTGTGGTAAATAAGAATTTGAGACCTGTTATACCTTCTACCTGTCCACCTGCTATGCGAGCTTTAATTGAGCAATGTTGGTACTCACAACCAGATAAGAGGCCCGAGTTTTGGCAGATTGTTAAGGTATTAGAACAATTTGAGTCTTCGCTGGCCCTTGATGGAACCCTGAATCTTGTGCAAAACCTGAGTTGCCTAGACCATAAGAAAGGGCTTCTTCATTGGATCCAAAAGCTTGGTCCTGTGCATCAGAATAATAACCCTGTGCCTAAACCGAAGTTCACATGA 1470 0.4449 MEEDTSSWIRRTKFSHTVCHRLDPSRLASIPLRIEPSHSGLKSRPLSVSFNLKEVSDAPKIHQNPNVKKPRSVSPVPETSLSETFREARSERKRFSTPGPRRKEHHDKRIMGKLLNKDSREVKASNSKSPARSPIRHMPSMKSNDNGKNRKESAWTKYFDHGGGRVTAVETAEEWTVDLSKLFLGLRFAHGAHSRLYRGNYKDEPVAVKLIRVPDDDESGTMAGRLEKQFIREVTLLSRLHHPNVIKFVAACRKPPVYCVITEFLSEGSLRAYLHKLERKTVPLEKLIAYALDIARGMEYIHSQGIIHRDLKPENVLINEESHLKIADFGIACEEAYRDVFTDDPGTYRWMAPEMIKRKSYGRKVDVYSFGLILWEMVTGTIPYEDMTPIQAAYAVVNKNLRPVIPSTCPPAMRALIEQCWYSQPDKRPEFWQIVKVLEQFESSLALDGTLNLVQNLSCLDHKKGLLHWIQKLGPVHQNNNPVPKPKFT 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2671 489 Gene3D Phosphorylase Kinase; domain 1 170 265 - -
Dere02g2671 489 PRINTS Tyrosine kinase catalytic domain signature 409 431 IPR001245 GO:0004672|GO:0006468
Dere02g2671 489 PRINTS Tyrosine kinase catalytic domain signature 300 318 IPR001245 GO:0004672|GO:0006468
Dere02g2671 489 PRINTS Tyrosine kinase catalytic domain signature 365 387 IPR001245 GO:0004672|GO:0006468
Dere02g2671 489 PRINTS Tyrosine kinase catalytic domain signature 262 275 IPR001245 GO:0004672|GO:0006468
Dere02g2671 489 PRINTS Tyrosine kinase catalytic domain signature 346 356 IPR001245 GO:0004672|GO:0006468
Dere02g2671 489 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 122 443 - -
Dere02g2671 489 ProSitePatterns Serine/Threonine protein kinases active-site signature. 306 318 IPR008271 GO:0004672|GO:0006468
Dere02g2671 489 Pfam Protein tyrosine and serine/threonine kinase 188 438 IPR001245 GO:0004672|GO:0006468
Dere02g2671 489 MobiDBLite consensus disorder prediction 67 83 - -
Dere02g2671 489 Gene3D Transferase(Phosphotransferase) domain 1 266 461 - -
Dere02g2671 489 CDD STKc_MAP3K-like 189 438 - -
Dere02g2671 489 SMART serkin_6 182 441 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g2671 489 MobiDBLite consensus disorder prediction 84 125 - -
Dere02g2671 489 ProSiteProfiles Protein kinase domain profile. 182 442 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g2671 489 FunFam serine/threonine-protein kinase HT1 267 459 - -
Dere02g2671 489 MobiDBLite consensus disorder prediction 57 150 - -
Dere02g2671 489 SUPERFAMILY Protein kinase-like (PK-like) 166 438 IPR011009 -
Dere02g2671 489 FunFam Serine/threonine-protein kinase isoform 1 172 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2671 Dere-ChrDere02 29974706 29977392 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2671 1 489 MAP Kinase Kinase Kinase AT5G58950 58.065 0.0 603
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Dere02g2671 PK_Tyr_Ser-Thr 1.9e-63 CL0016