Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2639 ATGAGTTGTAGCTGCTTTGGAGCCGCAACTATCAAGAGGAAAAGGAGTCCTACTCATAATCCTCATGACATTGATGGTAATGCTCTTGATAATGTGAAGAACTTCTCTGATCAAGAACTAAGGCTGGCAACAGATAATTATGACTCAAGGAACAGGATTGGACGAGGAGGTTTTGGAACTGTTTACCAGGGGACCTTGAGAGACGGAAGACAGGTAGCAGTGAAGACCCTTTCTGCAGGATCAAGGCAGGGAGTTCGTGAATTTTTGACTGAAATTAAGACTATATCAAATGTTAAGCATCCAAACCTTGTTGAATTGGTCGGTTGCTGTGTTCAAGGACCTAATCGCATTTTAGTCTACGAGTATGTGGAAAATAACAGCCTCGATCGTGCATTACTTGGCATGAGGAGTACAGGCATCAAACTAGACTGGAGAAAAAGATCTGCAATCTGCATGGGTACTGCTAGGGGCCTTGCATTCCTGCATGAGGAACTTGTTCCACACATTGTGCACAGAGACATTAAAGCTAGCAACATACTGCTTGACAAAGACTTTAATCCGAAAATAGGAGATTTCGGGTTGGCTAAATTATTCCCTGATGACATCACTCACATTAGCACTAGAATTGCTGGAACAACCGGTTATCTAGCACCAGAGTATGCTTTAGGTGGCCAATTAACCATGAAGGCCGATGTATACAGCTTTGGAGTTCTTATACTAGAAATAATTAGTGGCAAAAGCAGTGCTAGGACAAAATGGGGAGGGACTGATAAATTCCTCTTGGAATGGGCCTGGCAACTTCATGAGGAAGGGAAACTCTTGGAACTAGTGGATCCAGAGATGGGAGAATTTCCTGAGGAAGAAGTGATTAGGTACATCAAGGTAGCTTTTTTCTGCTCACAGGCGGCAGCAAACAGAAGGCCATTGATGTCCCAGGTTGTCGATATGCTGTCCAGGAGAATTCGGCTCAATGAGAAGGAACTTACAGCACCAGGGTTCTTCCAGGATTCTGGAGAATCCTCTATGAAGAAGTCATCCACTGACTCAACAGGCTATCAGACTAACTCTATCCTTGCCACTATTACTCAAGTGACCCCACGATGA 1104 0.4402 MSCSCFGAATIKRKRSPTHNPHDIDGNALDNVKNFSDQELRLATDNYDSRNRIGRGGFGTVYQGTLRDGRQVAVKTLSAGSRQGVREFLTEIKTISNVKHPNLVELVGCCVQGPNRILVYEYVENNSLDRALLGMRSTGIKLDWRKRSAICMGTARGLAFLHEELVPHIVHRDIKASNILLDKDFNPKIGDFGLAKLFPDDITHISTRIAGTTGYLAPEYALGGQLTMKADVYSFGVLILEIISGKSSARTKWGGTDKFLLEWAWQLHEEGKLLELVDPEMGEFPEEEVIRYIKVAFFCSQAAANRRPLMSQVVDMLSRRIRLNEKELTAPGFFQDSGESSMKKSSTDSTGYQTNSILATITQVTPR 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2639 367 Gene3D Phosphorylase Kinase; domain 1 19 122 - -
Dere02g2639 367 CDD STKc_IRAK 53 319 - -
Dere02g2639 367 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 30 350 - -
Dere02g2639 367 Gene3D Transferase(Phosphotransferase) domain 1 123 332 - -
Dere02g2639 367 MobiDBLite consensus disorder prediction 332 351 - -
Dere02g2639 367 SMART serkin_6 47 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g2639 367 MobiDBLite consensus disorder prediction 334 351 - -
Dere02g2639 367 FunFam cold-responsive protein kinase 1 18 122 - -
Dere02g2639 367 ProSitePatterns Protein kinases ATP-binding region signature. 53 75 IPR017441 GO:0005524
Dere02g2639 367 FunFam Putative LRR receptor-like serine/threonine-protein kinase 123 329 - -
Dere02g2639 367 ProSiteProfiles Protein kinase domain profile. 47 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g2639 367 SUPERFAMILY Protein kinase-like (PK-like) 30 331 IPR011009 -
Dere02g2639 367 PIRSF TyrPK_CSF1-R 45 128 - -
Dere02g2639 367 PIRSF TyrPK_CSF1-R 136 253 - -
Dere02g2639 367 PIRSF TyrPK_CSF1-R 276 364 - -
Dere02g2639 367 Pfam Protein tyrosine and serine/threonine kinase 51 316 IPR001245 GO:0004672|GO:0006468
Dere02g2639 367 ProSitePatterns Serine/Threonine protein kinases active-site signature. 169 181 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2639 Dere-ChrDere02 29540071 29545346 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2639 10 357 Receptor kinase-like Gene Family AT1G56120 49.859 2.19e-110 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dere02g2639 PK_Tyr_Ser-Thr 2.8e-45 CL0016