Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2609 ATGGCTAGAGAGATACTGAACTCTGAATCCCAGAAACAGCAGTTACCAGAAACAAAACTAGGAAAAATCTATGTGAAAGCTAACCCACCTGTCACTCTTAAGTTTGAAGATGTCGTGCACAAAATCAAAATCAGGATAGGGGGAAGCTTGTTCTGCAGAAAGACAAGTTCAGAGGAGAGGCTGACCCTGAAAGAAGTTAATGGTGTTGCTCTACCAGGAGAATTGCTAGCCATTTTAGGCCCTTCTGGAAGTGGCAAAACAACTCTTCTAGCTGCTTTAGGAGGTAGACTCAATGAAACCACCATTAGTGGAAACATAACCTACAATGGCAAACCCTTCTCAAAACAAGTGAAGAAAAACATCGGTTTTGTTGCTCAGAATGATGTCTTCTTCCCTCACCTTACAGTCAGTGAGACGCTAGTTTTTACTGCTCTTCTTCGCTTGCCAAATAGTCTCTCCAAAGAAGATAAAATCACACATGCCGAGGCCATCATGAATGAGCTTGACCTGATCCATTGTAAGGACACTATAATGGGAGGGCCATTTTTAAGAGGTGTTTCTGGTGGAGAATGGAAGAGGGTTAGTATAGGGCAAGAACTTCTGACTAATCCAAGTCTACTGCTGGTTGATGAGCCTACCTCAGGTCTTGACGCAACCACAGCCAGAAGAATTGTTTTAACCCTATGTGAGTTAGCTAAAGGTGGAAGGACCATTGTGATGACAATCCACCAGCCATCTAGCAAGCTGTTTTACTTGTTTCAAAAGGTTCTGCTGTTATCAGATGGTACTAGTCTTTACTTTGGGAAGGGAGAGTATGTAATGAATTACTTCTCCAGCATTGGGTATGTTCCAGCCTTAGCCATGAATCCCTCAGATTTCCTACTCGATCTTGCAAATGGTATATCTTCTGGGAATCCTAACGCGGATACAAGAGCTGTAAAACAAGCATTGTTATATGCTTTTGAGGTTAACCTTGGCCACCGAGTGAAAATGGAACTTCAAGATTCCAGGGTTCAATTTCATGAGAGTTCAGCAGATGACAGATATAGCCAATGGTGCACAACGTGGTGGCAGCAGTTCATTGTATTACTAATAAGGGGATTCAAGGAAAGAAAGTTTGAGTCCTTCTCAACCCTCAAAATCTGCCAAGTCTTGGCCGTTTCTCTTATTTCAGGCCTTATCTGGTGGCAATCCGGATTTCATAACATTCAAGATCAGGTAGCGCTTCTATTCTTCTACACTCAATTCTGTGGCTTCTACCCTATGGCCCAAGCCATCTTTACCTTTCCTCGCGATCATGGTGTGCTAATAAAGGAAAGGTCTTCACGCATGTACAGACTCTCATCTTACTTCATGGCTAGCAATTTTGTAGACCTTCCAATGCAGCTATCCCTCCCAGCCCTTTTTGTCACTATAACTTATTGGATGGGAGGGCTAAAAGTCAATGCTATGATCTTCATCCACACTCTAACCGTTCTTCTTCTCTATACATTAGTTGCACAAGGTCTTGGACTAGCTGTTGGTGCACTAGTGAATAATCAGAGTGCTGCTGCTACAGTTGGATCAGTTGTGATGACACTGTTTGTTCTTGCCAATGGTTTCTATGTTCAGAATATGCCTGTGTTTGTGATGTGGATAAAGAGCATATCTCCTAGCTATTATTGCTTCAAGCTCTTATTGGGTTCACAGTTCAAGAATAGTGAAACTTACCCTTGTGGAGGACCAAATGTGACCTGCTTAGTTGGGAGCTATCCAGTGATTAAGCATGCAGGCCTTGACAAGCAAGGTTTCTGTGTAGTTGCTTTGGCTGTGATGCTTGTAGGGTATAGACTCATTGCCTATTTTGCTCTTATGAGTGGTATCAGAAACATTTAG 1875 0.4256 MAREILNSESQKQQLPETKLGKIYVKANPPVTLKFEDVVHKIKIRIGGSLFCRKTSSEERLTLKEVNGVALPGELLAILGPSGSGKTTLLAALGGRLNETTISGNITYNGKPFSKQVKKNIGFVAQNDVFFPHLTVSETLVFTALLRLPNSLSKEDKITHAEAIMNELDLIHCKDTIMGGPFLRGVSGGEWKRVSIGQELLTNPSLLLVDEPTSGLDATTARRIVLTLCELAKGGRTIVMTIHQPSSKLFYLFQKVLLLSDGTSLYFGKGEYVMNYFSSIGYVPALAMNPSDFLLDLANGISSGNPNADTRAVKQALLYAFEVNLGHRVKMELQDSRVQFHESSADDRYSQWCTTWWQQFIVLLIRGFKERKFESFSTLKICQVLAVSLISGLIWWQSGFHNIQDQVALLFFYTQFCGFYPMAQAIFTFPRDHGVLIKERSSRMYRLSSYFMASNFVDLPMQLSLPALFVTITYWMGGLKVNAMIFIHTLTVLLLYTLVAQGLGLAVGALVNNQSAAATVGSVVMTLFVLANGFYVQNMPVFVMWIKSISPSYYCFKLLLGSQFKNSETYPCGGPNVTCLVGSYPVIKHAGLDKQGFCVVALAVMLVGYRLIAYFALMSGIRNI 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2609 624 FunFam ABC transporter G family member 22 51 280 - -
Dere02g2609 624 Pfam ABC transporter 64 214 IPR003439 GO:0005524
Dere02g2609 624 Gene3D - 52 280 IPR027417 -
Dere02g2609 624 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 33 286 IPR003439 GO:0005524
Dere02g2609 624 ProSitePatterns ABC transporters family signature. 186 200 IPR017871 GO:0005524|GO:0016887
Dere02g2609 624 SMART AAA_5 72 263 IPR003593 GO:0016887
Dere02g2609 624 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 14 613 - -
Dere02g2609 624 Pfam ABC-2 type transporter 243 347 IPR043926 GO:0140359
Dere02g2609 624 Pfam ABC-2 type transporter 358 564 IPR013525 GO:0016020|GO:0140359
Dere02g2609 624 CDD ABCG_EPDR 30 268 - -
Dere02g2609 624 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 58 280 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2609 Dere-ChrDere02 28983741 28986313 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2609 73 271 Calmodulin-binding Proteins AT2G36910 29.245 2.30e-10 62.0