Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2601 ATGGATATTCTATCAAAAGTGACAATTTTCTGCACTTTGGCGCTTGTAGTACTTGTGCTGCTATGTGTTGCGAAGCCTGTTATCTCTTCTAGACACAGTCAATATTATTGGGATCATGGTGGGAGGAAACTGAGCTCTGGAGATAATGATCAGGATTTTGTCATCAACTTGCCTGGTCAGCCTCATGCAGATTTCCAGCACTATGCTGGCTATGTCACTGTGAATGAAACTAATGGAAGAGCACTCTTCTATTGGTTCTATGAGGCCATCTCCAAACCTGAAGAAAAACCTTTGGTGCTTTGGCTTAATGGAGGTCCTGGGTGCTCTTCTGTGGGATATGGAGCAACACAGGAGATTGGCCCTTTTTTAGTGGACACTGATGGCCAGGGTCTAAAATTTAATAACTTCTCATGGAACAGAGAAGCCAACATTTTATTCCTGGAATCTCCTGTTGGAGTTGGCTTTTCCTACTCCAACACAACCAGTGATTATGAACATCTTGGAGATGACTTCACAGCTAATGATGCTTACAATTTTCTGCACAAGTGGTTTCTCAAGTTTCCATCTTATAGAACAAGGACATTTTACATAGCAGGAGAGAGCTATGCTGGAAAGTATGTACCTGAGCTGGCTGAGCTCATCCATGATAGGAACGAGGACCCTTCCCTTCGTATTGATCTTAAGGGTATCCTGCTGGGTAATCCAGAAACATCTGATGCTGAGGATTGGAAGGGTCTTGTGGATTATGCTTGGAGCCACGCTGTGATATCTGATGAAACTCACAGAGCAATCAGTGAAAGTTGTGACTTCACGAGCAGTGACCCATGGAGTAACGAAACCTGCAGTGATGCTGTGGACGAAGTGCTTAAACAGTACAAAGAGATTGACATCTACAGCCTTTACACCTCTGTCTGCTTCGCCACTACTGCTCGTTCCAATGATCAATCCATGCGACGCGTCATGAATTATAAGCGCTCGTCTAAAATGATGCCTAGGATCATGGGTGGTTACGATCCATGTTTGGATGATTATGCCACAGCTTTCTATAACAGACCAGATGTTCAGAAGGCTCTTCATGTCAGCGATGGTCACACTCTTAAGAATTGGAGTATTTGCAACGACAAGATATTCAAGCACTGGAAAGATTCAAAGCCATCTGTTATCCCTATTTACAAGAAGCTTATTTCAGCAGGACTTAGAATTTGGGTTTACAGTGGAGACACAGACGGTAGAGTGCCAGTACTGTCCACAAGATACAGCTTAAGTGCTCTGAATTTGCCTATCACTAAGACATGGAGGCCATGGTATCATGAGAACGAGGTAAGTGGGTGGTATCAAGAGTACAACGGGCTTACATTTGCAACGTTCCGAGGAGCAGGACATGCAGTGCCATGTTTCAAACCAAGCAATTCACTTGCATTCTTCTCCTCATTTCTGCATGGACAATCCCCACCTTCTACTAAATAA 1467 0.4376 MDILSKVTIFCTLALVVLVLLCVAKPVISSRHSQYYWDHGGRKLSSGDNDQDFVINLPGQPHADFQHYAGYVTVNETNGRALFYWFYEAISKPEEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGQGLKFNNFSWNREANILFLESPVGVGFSYSNTTSDYEHLGDDFTANDAYNFLHKWFLKFPSYRTRTFYIAGESYAGKYVPELAELIHDRNEDPSLRIDLKGILLGNPETSDAEDWKGLVDYAWSHAVISDETHRAISESCDFTSSDPWSNETCSDAVDEVLKQYKEIDIYSLYTSVCFATTARSNDQSMRRVMNYKRSSKMMPRIMGGYDPCLDDYATAFYNRPDVQKALHVSDGHTLKNWSICNDKIFKHWKDSKPSVIPIYKKLISAGLRIWVYSGDTDGRVPVLSTRYSLSALNLPITKTWRPWYHENEVSGWYQEYNGLTFATFRGAGHAVPCFKPSNSLAFFSSFLHGQSPPSTK 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2601 488 Gene3D alpha/beta hydrolase 48 307 IPR029058 -
Dere02g2601 488 SUPERFAMILY alpha/beta-Hydrolases 49 483 IPR029058 -
Dere02g2601 488 Gene3D - 340 376 - -
Dere02g2601 488 FunFam Carboxypeptidase 48 307 - -
Dere02g2601 488 Gene3D - 387 481 - -
Dere02g2601 488 PRINTS Carboxypeptidase C serine protease (S10) family signature 183 208 IPR001563 GO:0004185|GO:0006508
Dere02g2601 488 PRINTS Carboxypeptidase C serine protease (S10) family signature 147 157 IPR001563 GO:0004185|GO:0006508
Dere02g2601 488 PRINTS Carboxypeptidase C serine protease (S10) family signature 134 146 IPR001563 GO:0004185|GO:0006508
Dere02g2601 488 PRINTS Carboxypeptidase C serine protease (S10) family signature 451 464 IPR001563 GO:0004185|GO:0006508
Dere02g2601 488 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 55 468 IPR001563 GO:0004185|GO:0006508
Dere02g2601 488 FunFam Carboxypeptidase 387 481 - -
Dere02g2601 488 Pfam Serine carboxypeptidase 61 481 IPR001563 GO:0004185|GO:0006508
Dere02g2601 488 ProSitePatterns Serine carboxypeptidases, serine active site. 197 204 IPR018202 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2601 Dere-ChrDere02 28804595 28808822 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2601 345 482 Calmodulin-binding Proteins AT2G22960 35.971 7.07e-20 85.5