Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2591 ATGGGGACGGAGGTGACGGGGTCGTGGGGTACGTGGGAGGAGCTCCTGCTCGGTGGGGCTGTTCTCCGGCACGGGACCCGAGACTGGGACGTCGTCGCGGCGGAGCTCCGAGCCCGAACCATATGTCCGTACACTTTCACCCCCGAGGCCTGTAAAGCCAAATATGAAGACTTGAAAGAGCGCTACACTGGATGCACTGCTTGGTTTGAGGAGCTTAGGAAGAAAAGAGTGGCAGAGCTAAAGAGAGCTTTGGAGCTCTCTGAAGATTCAATTGGATCTCTTGAATCAAAGATTGAATCTCTCAAGGCCGAGAAGAAGGAGAATGAAAGAGATAATTCTTGCGTCCACAATAACAATGGTTCTGAGATGGAGACAAAGCCTGAAGTGTCACACTCTTGTGACGAGTATGAGAAAGTCTCGAATGTGGTAGACAAGTTGGCATATGCTATGTACGGAGGACAAGTGAGAGGGAGTACTATGAAGAAGAGGAGAGGGAAGAGGAAGAGGAAGGATTGTAGCAGAAACAACAATGGGAAGGAAACAAGTGTGGGAGACAGTGAGTTTTTGTTGGATTTGTCGGGTGATGTTGTCGTGTCTGGGTGTAAGGAAAATTCAACCAGCAATAACTGTGTGGTGGAGGATCAAAGGAGGAGTTTCAGAGAGGATGGAGTGGAATGTTTGATGGAGATTTTAGACAGTGTTTTGGAAAATAAAGTTGCCTCTGCTTTTAGACGTCGCCTTGATAGTCAGAAGAGGGGAAGGTACAAGAAGATGATCAGGAGGCACATGGACTTGGACACCATAAGATCAAGAATCACCACCCAAGCCATAAAATCAGCAAAGGAGCTCTTCCGAGACCTACTCTTACTGACAAACAATGCTCTGGTCTTCTACTCCAAGACCACTCGCGAGTACAAATCCGCTCTGCTCCTCAGGGACCTTATCACCAAGAAACTCAAGCAAAAACAGAGTCCTCACAATTTCACAATCAGATCACCAGAACCTACCCGAGTAGACCATAGCGTCTCTCCCAAAATACCTGTTCATAGCAATGCTCCTCCTCCTCCTGTGAAACCCAGAAGTGTAAGACCAGGAAATAGAAAGATTGTAGCATCAAAGGTAGATGGTGCAAGCATTTCTGCTTCTGGGGTTTCTCTTGGAGCTAGGAAAGCACCTGGTAAACTCAGTCCTAATTCAACACCTCCTTCAGTGGAATCTTTGTCTGTGAATAAGAAGAAGAAGAAGAAAGGGATTGGTAGGCCTAAAAGGGTTGGACGTGGAGGTGCAGGGCAAGGACCTATAATGGCTGTTAAAGGTAATAGAAAAGTTAGAGCAAAGTGA 1341 0.4705 MGTEVTGSWGTWEELLLGGAVLRHGTRDWDVVAAELRARTICPYTFTPEACKAKYEDLKERYTGCTAWFEELRKKRVAELKRALELSEDSIGSLESKIESLKAEKKENERDNSCVHNNNGSEMETKPEVSHSCDEYEKVSNVVDKLAYAMYGGQVRGSTMKKRRGKRKRKDCSRNNNGKETSVGDSEFLLDLSGDVVVSGCKENSTSNNCVVEDQRRSFREDGVECLMEILDSVLENKVASAFRRRLDSQKRGRYKKMIRRHMDLDTIRSRITTQAIKSAKELFRDLLLLTNNALVFYSKTTREYKSALLLRDLITKKLKQKQSPHNFTIRSPEPTRVDHSVSPKIPVHSNAPPPPVKPRSVRPGNRKIVASKVDGASISASGVSLGARKAPGKLSPNSTPPSVESLSVNKKKKKKGIGRPKRVGRGGAGQGPIMAVKGNRKVRAK 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2591 446 MobiDBLite consensus disorder prediction 321 336 - -
Dere02g2591 446 Pfam Bromodomain 228 308 IPR001487 GO:0005515
Dere02g2591 446 SMART bromo_6 220 324 IPR001487 GO:0005515
Dere02g2591 446 MobiDBLite consensus disorder prediction 321 365 - -
Dere02g2591 446 Gene3D - 219 334 IPR036427 GO:0005515
Dere02g2591 446 MobiDBLite consensus disorder prediction 385 446 - -
Dere02g2591 446 SUPERFAMILY Bromodomain 214 326 IPR036427 GO:0005515
Dere02g2591 446 PANTHER DNA-BINDING BROMODOMAIN-CONTAINING PROTEIN 7 178 - -
Dere02g2591 446 CDD SANT 8 59 IPR001005 -
Dere02g2591 446 MobiDBLite consensus disorder prediction 157 184 - -
Dere02g2591 446 CDD Bromodomain 225 319 - -
Dere02g2591 446 Coils Coil 77 118 - -
Dere02g2591 446 SMART sant 5 61 IPR001005 -
Dere02g2591 446 MobiDBLite consensus disorder prediction 105 129 - -
Dere02g2591 446 ProSiteProfiles Bromodomain profile. 235 305 IPR001487 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2591 Dere-ChrDere02 28636556 28642500 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Dere02g2591 Bromodomain 7.3e-14 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere02g2591 02 28636556 28642500 Dere02g2591 02 28636556 28642500 CCT