Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2576 ATGGATGCTACAAGGTTGTTTCTTATAAATAAAGCATCCATAATGAATTGGTGCATGGTATCTTTCAGTGAAACGCCTGTAATTTTTCCATCGTTCACTCTGTTTCAGTATCCAATTGTTAGTGTGTTACACATGCTTAAACACCATATGAGGGTTTATATTTCTTCATCTGTTACCATGGATGTTGTTGGATCTGTGGCAAGCATCATGAGCTGCTTGTGCTCACTGAACTCCCTGCAAGAATCACTTGCACGACAGTACAGACACCTTAGAAAACCAAGGAAGAGTTATAATAAGCTGAAAGAGTTAGTGGAAGAGCTAGATGCCCGGAGATTTGATGTGAACACTAAACTAGATCAATTGTGGCTGGGGAAAGGGATGAAGCCTAAGGAAGAGGTAAAGTTGTGGATGAAAAGTGTTGATCGAGTTAAAAGCCAAGTGAGCAGCCTCACGGACAATAACAATGGCTGTTCTTTCAACTTTGTTTGCTCGAGAATAAAATTTGGAGAAGTTGTAGAAGAGAAGATTAGTGAGGTCAAAGAACTTCTTGACAGGGGTCAATTCATGGATGATTCATTGGTTGAAAACTTACCCAGGATAGGGTATACTCTTCCTGCATCACTAGTAATGGAGTGTGCTACAACGATGCAGAGTCTAACGAGGATTTGGGAATGCTTATTACAAGAGAGTGCTAAAAGGATTGGAGTTTACGGGATGGGAGGAGTAGGAAAAACAACTATCATGACAGAAATCAACAACCGTCTTTTAAAAGGGAGAGATTTTGACTTAGTCATATGGGTTAGTGCGCCAAAAGAGCCAAACCTTGTGAAACTACAGAAGGATATAGCAGAGAAGGTGGATTTGGATCTTTCAATGTACGAGGATGATGTTGCTAGAGCAGCCAAGCTATTTGAGGCTCTGAACAGGAGGAGGAGATTTACACTGATTCTGGACGATTTATGGGAGCCTTTCTCTCTTGAAACAGTTGGAATACCGATACCAACAGTAGAGAATGACCAAGATGTAGAAGTGAAGGCTCTTCAGGATGATGAAGCGTGGGATCTCTTAAGCGATAAAGTTGGACCAGTAGTGTCAAATTCTCCAGAACTACATATGATTGCAAAGGATGTGACAAAAGAATGTGGTGGTTTGCCTCTTGCCATTGTCACTATTGGGAGAGCCCTGAGAAATGCGGTCGATGTATCAGAGTGGGAGTGTGCATTAGCAGAGTTAAGAGCCTCAACAGCAAACATTGATAGGATGGAAGAAGCAGTGTTTGCACACTTAAGATTTAGCTATGCCAAGCTAAAGGATGACACAAGCAGGTCTTGTTTCCTCTTTTGTGCTTTACACCCTGAAGGTCATCAAATTGATGCCAATGAGCTGATAGAGTATTGGATGTGGGAAGGTTTGTTGGGTTATGTTGGGAGAATAACTGCAATCAAGAGGAGGGGAAAAATCATATTGAACGAATTAAAATATTCATGCTTGCTTGAGGGTCTTACTCAAAATGGGGTGGAATTTGTCAGAATGCATGATTTGATCAGAGATATGGCCATCACAATCATGAGAACGAACCCTCACTGCATAAGTAAAGCTGGAACTAGAATGACAAAACATCAGTGGATGGATGAATGGGCAGAAGATGTTCAAAGGGTCTCATTAATGAGAAATGACTTGAAATGTATTCCCTTCAACTTCAACCTTGTGTGTCCAAGACTTACGTCCTTACTGTTGCAATTCAACTCATTTTCTGAAAATTTAAGCCATGAGTTTTTGGACAATATGCGATTTCTGAAAGTTTTGGACCTCTCTTATACTGGGATTAATTTCTTGCCTGAGTCCGTCTCTAATTTAGAGAATCTGTATGCTCTGTTATTGAGCAACTGTTGGAATTTATCAGCAGTACCTTCTTTAGCAAAACTGAACAAGCTGATGGTTTTGGATCTCTCTTGCTCTCCAGGAATGAAAGAACTTCCAAATGGGATGCAAAATTTAGGGAATTTGAGACGCTTGAATCTTTCCAAGACAAGAATTGAAATATTCCCATTTGGATTAATATCCAAATTCGCCCTTTTGGATGACTTACTGATAGGTGGTTGTGGAATCTTTTTGGGATCAATGACAGTCAAAGCCATCAGTGGTGGAGCTTGCATTGAAGAACTCATTTCTTCTAATTTATCTTCTCTTGAAGTAGACTTGTGGAATGCCGATGTGTTTGATCAATATGCCAAATCTGGACATTGGGATCACCTGGATAGGTTCAGGATAACAACTGGGCAGCCCCAGGTACAGTTCTTTGAAGAAAGAAGCTTAGCCTTTAATGGAAGATTTATTCTAAGAGGAAACCAAGTTTCTCTACCACCAAACATCTTGGAGTTGCATCTGGATGACTGTGCTGATATTAGGCATCTAAGCTTGTGCTTACTGAATGTGACACAGTTGAAATACTGTAAAATCAGGTGGTGTGACGACATGGAATACATAATTGACTCAGACGAAGAGGAAAACACTTTATCCATGCTGGAGAGAATGGAGCTATTAGTTTTAGGAAACTTGAAGATGATATGTAGAAATGTGGTGAGACCGAGCACTCTTATGAGCCTGAAGATCATTCATGTGGAGTATTGTCCAAAACTGAAGACTTTATTCTCAGTGCAGATTTTGCTTCAACTTAAAAATCTGGAAGAAATTAGTGTCCGTAGTTGTACAAGTATGGAGGACCTAATGAAAGGAGAAGTAGGAGATGATCATGCTTCCGGAATTGACTTTCCAAAGTTAAAGAGGCTGAAGCTGAAATGTATGCCCCTCTTGACGAATATATATTTAGGAACCATTCTTTGTCCTTCTTTAAGAAGCCTTGAAGTAGCATCCTGTGAAGCTCTGAAGAGGCTTCCCCTTTCTCTATTAGCACCACCTGCACTTGAAGAAATCAAAGCAACAAAGGATTGGTGGGAGTCATTAGAGTGGGATCAACCTGATTCTAAAGCTAAAAAGAAGAATAATCAACTTCGCCATGTCAGTTAG 3027 0.4027 MDATRLFLINKASIMNWCMVSFSETPVIFPSFTLFQYPIVSVLHMLKHHMRVYISSSVTMDVVGSVASIMSCLCSLNSLQESLARQYRHLRKPRKSYNKLKELVEELDARRFDVNTKLDQLWLGKGMKPKEEVKLWMKSVDRVKSQVSSLTDNNNGCSFNFVCSRIKFGEVVEEKISEVKELLDRGQFMDDSLVENLPRIGYTLPASLVMECATTMQSLTRIWECLLQESAKRIGVYGMGGVGKTTIMTEINNRLLKGRDFDLVIWVSAPKEPNLVKLQKDIAEKVDLDLSMYEDDVARAAKLFEALNRRRRFTLILDDLWEPFSLETVGIPIPTVENDQDVEVKALQDDEAWDLLSDKVGPVVSNSPELHMIAKDVTKECGGLPLAIVTIGRALRNAVDVSEWECALAELRASTANIDRMEEAVFAHLRFSYAKLKDDTSRSCFLFCALHPEGHQIDANELIEYWMWEGLLGYVGRITAIKRRGKIILNELKYSCLLEGLTQNGVEFVRMHDLIRDMAITIMRTNPHCISKAGTRMTKHQWMDEWAEDVQRVSLMRNDLKCIPFNFNLVCPRLTSLLLQFNSFSENLSHEFLDNMRFLKVLDLSYTGINFLPESVSNLENLYALLLSNCWNLSAVPSLAKLNKLMVLDLSCSPGMKELPNGMQNLGNLRRLNLSKTRIEIFPFGLISKFALLDDLLIGGCGIFLGSMTVKAISGGACIEELISSNLSSLEVDLWNADVFDQYAKSGHWDHLDRFRITTGQPQVQFFEERSLAFNGRFILRGNQVSLPPNILELHLDDCADIRHLSLCLLNVTQLKYCKIRWCDDMEYIIDSDEEENTLSMLERMELLVLGNLKMICRNVVRPSTLMSLKIIHVEYCPKLKTLFSVQILLQLKNLEEISVRSCTSMEDLMKGEVGDDHASGIDFPKLKRLKLKCMPLLTNIYLGTILCPSLRSLEVASCEALKRLPLSLLAPPALEEIKATKDWWESLEWDQPDSKAKKKNNQLRHVS 1008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2576 1008 SUPERFAMILY L domain-like 510 976 - -
Dere02g2576 1008 PRINTS Disease resistance protein signature 233 248 - -
Dere02g2576 1008 PRINTS Disease resistance protein signature 381 395 - -
Dere02g2576 1008 PRINTS Disease resistance protein signature 640 656 - -
Dere02g2576 1008 PRINTS Disease resistance protein signature 307 321 - -
Dere02g2576 1008 FunFam Probable disease resistance protein At1g63360 433 521 - -
Dere02g2576 1008 Pfam NB-ARC domain 217 339 IPR002182 GO:0043531
Dere02g2576 1008 FunFam Probable disease resistance protein At5g66910 346 432 - -
Dere02g2576 1008 Gene3D - 433 521 IPR036388 -
Dere02g2576 1008 Gene3D - 346 432 IPR042197 -
Dere02g2576 1008 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 219 448 IPR027417 -
Dere02g2576 1008 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 89 966 - -
Dere02g2576 1008 Gene3D Ribonuclease Inhibitor 526 750 IPR032675 -
Dere02g2576 1008 Gene3D Ribonuclease Inhibitor 864 989 IPR032675 -
Dere02g2576 1008 Gene3D - 210 345 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2576 Dere-ChrDere02 28496219 28500505 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2576 234 678 WRKY Transcription Factor Family AT5G45050 22.622 8.52e-10 61.2