Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2553 ATGGGTGATGAAGCGGGAAGCAGAGTTGCGAGAATTGACCGGGACTCGCTGGAAGCGTTCGCCGGGGATTCTGTTCTCCGGCCAGCCGTAGAGTTTATATTCTCCTTGATTTCTCTTTCTCATTCAGTCAGGGTATTCGCGGCAAAATGGCAACTGATTCGAAACAAACTCGAGGAGCTCCATTCCGGGCTAATCGCCGCCGAGAACTGCGATTCCGGTGAGAACCCATCACTCTCCGGTCTTGTTCCTGCGATATTGGCTACCGTGAACGAGTGTTACGATCTCGCTCGCCGCTGCGTTGATCTCTCGTACAGTGGGAAGCTTATGATGCAGAGCGAGTTGGATGTGATGTTCGCCAAGTTCGATCGCCACGTGAAGAAGCTATCAGAGGTATATACAGCTGGTATTTTAACTCAAAAGTACGCTCTCGTTGTTTCGAGGCCTAGTGTCGGAGCTTGCAAAGATGATATTAGGTTTTACATGAGAGACTTGCTGACCAGAATGAAGATTGGCGATGTTGCAATGAAGAGGCAGGCTCTGATTAATCTGCACGAGGCTTTGGCGGAAGACGAAAAGTATGTGAAAGTGATTGCGGAAATGGGAGATATAGTTCATGTTCTGGTGAATTTTCTTGATTCGCCGGAGACGGAAATCCAGGAGGAATCTGCCAAGGTGGTTACTGTTATCGCAGGCTTTGATTCCTACAAAGGGGTTTTGATCTCATCTGGGATTATTGCGCCTCTGATTCGGGTTTTGGAATGTGGGAGTGAGTCAGGGAAGGTAGGGGCTGCCAGGTGTTTGATGAAATTAACGTTCAATTCAGACAATGCTTGGTCTGTTTCAGCTCATGGAGGGGTCACGTGCTTGCTCAAAATCTGCTCGAATGGAGAATCCAAGGGAGAATTGGTTGCTCCAGCTTGTGGGGTATTGAGAAATCTAGTGGGTGTTGAAGAAATAAAGAGATTCATGGTTGAAGAAGGTGCGGTCTCCTCGTTTATCAGGCTTGTGAAATCCAAGGACGAAGCGATTCAGGTAAATTCCATACAATTTATTCAAAGTATTGCCTCTGGAGATGAGCTGGTAAGGCAAATGGTAATTAGAGAAGGTGGGGTTCGAGCTTTATTACGTATTTTGGATCCTAAATGGTCGCATTCTTCTAAAACCAGGGAGATAGCAATGAGAGCTATTGAAGATTTATGTTTTTCTTTATCTAGTTCTGTAAGTATACTAATGAATTATGGGTTTGTGGATCAACTGTTATATTATATTCGTAATGGGGAGGTTTCCATCCAAGAATTGGCTCTGAAAGTAGCATTCAGATTCTGTGGAACATTAGAGGAGGCTAAGAAAGCAATGGGCGATGCAGGTTTCATGCCAGAACTTGTTAAATTTCTAAATGCAAAATCATTTGAAGTTCGTGAAATGGCAGCCGAGGCACTCTCTATTATGGTTATGGTGCCCAAAAATAGAAAGAAATTTGTGCAGGATGACCAAAACATTGCCCTTCTTCTACAACTGCTTGACCCAGAAGAGGGAAATTCTGGTCACAAAAGGTTCCTAATCTCTATCTTAATGTCATTAACAAGTTGTAACAGTGGGAGAAAAAAGATTGTGAGTTCTCGGTATGCCAAGAACATAGAGAAACTTGCTGAAGCTGAAGTTTCTTCTGATGCCAAGAGACTTGTGAGGAAGCTATCCACAAACAGGTTCCGCAGTATGTTAAGTGGAATCTGGCACTCATGA 1743 0.4435 MGDEAGSRVARIDRDSLEAFAGDSVLRPAVEFIFSLISLSHSVRVFAAKWQLIRNKLEELHSGLIAAENCDSGENPSLSGLVPAILATVNECYDLARRCVDLSYSGKLMMQSELDVMFAKFDRHVKKLSEVYTAGILTQKYALVVSRPSVGACKDDIRFYMRDLLTRMKIGDVAMKRQALINLHEALAEDEKYVKVIAEMGDIVHVLVNFLDSPETEIQEESAKVVTVIAGFDSYKGVLISSGIIAPLIRVLECGSESGKVGAARCLMKLTFNSDNAWSVSAHGGVTCLLKICSNGESKGELVAPACGVLRNLVGVEEIKRFMVEEGAVSSFIRLVKSKDEAIQVNSIQFIQSIASGDELVRQMVIREGGVRALLRILDPKWSHSSKTREIAMRAIEDLCFSLSSSVSILMNYGFVDQLLYYIRNGEVSIQELALKVAFRFCGTLEEAKKAMGDAGFMPELVKFLNAKSFEVREMAAEALSIMVMVPKNRKKFVQDDQNIALLLQLLDPEEGNSGHKRFLISILMSLTSCNSGRKKIVSSRYAKNIEKLAEAEVSSDAKRLVRKLSTNRFRSMLSGIWHS 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2553 580 Gene3D - 161 569 IPR011989 -
Dere02g2553 580 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 284 328 IPR000225 GO:0005515
Dere02g2553 580 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 21 579 - -
Dere02g2553 580 Pfam Armadillo/beta-catenin-like repeat 447 481 IPR000225 GO:0005515
Dere02g2553 580 SMART arm_5 273 315 IPR000225 GO:0005515
Dere02g2553 580 SMART arm_5 232 272 IPR000225 GO:0005515
Dere02g2553 580 SMART arm_5 358 401 IPR000225 GO:0005515
Dere02g2553 580 SMART arm_5 445 485 IPR000225 GO:0005515
Dere02g2553 580 SMART arm_5 316 356 IPR000225 GO:0005515
Dere02g2553 580 SMART arm_5 190 231 IPR000225 GO:0005515
Dere02g2553 580 SUPERFAMILY ARM repeat 163 561 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2553 Dere-ChrDere02 28171566 28173308 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2553 144 434 U-box Gene Family AT2G23140 25.926 1.20e-13 72.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere02g2553 02 28171566 28173308 Dere02g2553 02 28171566 28173308 CCT