Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2539 ATGAATGTCGTGTACGAGTCGCATATGATGGTACTTTTGTTGGTATCCCATTTGAATTGCCCTCTTCCAAAGAGGCCAACCCTCCGCTCCATCAGCTTCCCAAAATGTTTCCAATTTGGTGGGCCTCAAGTGGGCCCTTCTCACACATGCTTCCTCTTCACTTCACTACCATGTGAACAACTGCCCCAACATGTCAAAGGGAAGAAAGAAGAAAGCGAAGCTTCTCTCTTTCTTTCCATCATTACAAGTTCTACCTTGAGACCATTTCTTTTTCCTCATTGTCTTCCCCATTTTGCATCCTTTGAATTGGTAAGGAAGAAAAGAAAAATGGAGTTCAATCTTGAAGACCCATTAGCCTGCTTCCAAGAGCAGCAAGACTGTAGCATATCAGAACTCTTTGCCTTAGAATCTGATCACATGCCCACCCCGAACTGTTTTCCTTTTCGTTGTGAAGCAGTTTCTCTTATCTCACAGGTTCAGTTTTCCTGCAATTTGGACCCTTTTGGAGCTTACCTTGCTATGAATTACTTGGACCGGTTCATGTCCAGGCAAGAAATGGAGCAACCAAACACAGCAATTTGTCCCGTGAGTTTGCAGCAAGGGAAGCCGTGGTTGCTCAGACTCATTGTTATCTCCTGTCTTTCTCTAGCTTCAAAGATGACGAACACATCCTTCCCAATTTCAGATTTGCAGATTGAAGGTTGCATCTTTGAGGCTCAAAGTATTCAGAAAATGGAGCTTCTTATACTTGGAGGCCTAGAATGGCGCATGAGGTCAATTACACCATTTTCTTTTTTGCATTTCTTCATCTCTTTAGCTAAGCATGAACTCAAAGACCCATCATCAAAACAAGCACTTAAAGCGCGAGCATCAGAGATAATCTTCAATGCTCATTATGACAAAAAATTCTTTGGGGTTAAACCTTCAATTATCGCTGCATCTGCACTTATCTCTGCATCTGGAGAGCTACTCCCACTGCAATACTCTGCTCTCAGAGTTTCAATTACAGCCTGTGAATATTTAGATGAGGAGACCATGTCCAAGTGCTTCAATTTGATGCAAGAGATGGAAAGGATAGAAGCAAACGAGTCAACCTTCAATTATGATAAGAGCATTACAAGCACAGAAACTCCAGTGAGTGTATTGGGGAGGAACATCGAAAGAAGGAGAATCTGA 1176 0.4243 MNVVYESHMMVLLLVSHLNCPLPKRPTLRSISFPKCFQFGGPQVGPSHTCFLFTSLPCEQLPQHVKGKKEESEASLFLSIITSSTLRPFLFPHCLPHFASFELVRKKRKMEFNLEDPLACFQEQQDCSISELFALESDHMPTPNCFPFRCEAVSLISQVQFSCNLDPFGAYLAMNYLDRFMSRQEMEQPNTAICPVSLQQGKPWLLRLIVISCLSLASKMTNTSFPISDLQIEGCIFEAQSIQKMELLILGGLEWRMRSITPFSFLHFFISLAKHELKDPSSKQALKARASEIIFNAHYDKKFFGVKPSIIAASALISASGELLPLQYSALRVSITACEYLDEETMSKCFNLMQEMERIEANESTFNYDKSITSTETPVSVLGRNIERRRI 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2539 391 SUPERFAMILY Cyclin-like 120 257 IPR036915 -
Dere02g2539 391 Pfam Cyclin, C-terminal domain 260 361 IPR004367 -
Dere02g2539 391 PANTHER CYCLINS 131 355 IPR039361 -
Dere02g2539 391 SMART Cyclin_C_2 260 380 IPR004367 -
Dere02g2539 391 SMART cyclin_7 154 251 IPR013763 -
Dere02g2539 391 FunFam D6-type cyclin 135 256 - -
Dere02g2539 391 Gene3D - 142 258 - -
Dere02g2539 391 Gene3D - 131 350 - -
Dere02g2539 391 Pfam Cyclin, N-terminal domain 147 257 IPR006671 -
Dere02g2539 391 FunFam D6-type cyclin 257 351 - -
Dere02g2539 391 SUPERFAMILY Cyclin-like 241 361 IPR036915 -
Dere02g2539 391 CDD CYCLIN_AtCycD-like_rpt2 260 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2539 Dere-ChrDere02 27969566 27974064 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2539 110 384 Core Cell Cycle Gene Families AT4G03270 39.322 1.06e-55 183