Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2536 ATGCCTCAAGATGACCCAGACGACATCATCCATGGCATACTAGAATCCACAGTTCTGCAAAATATGGGATTCAGAATTCCTCTGACTTTCATTAATACTCTTCTCGTAATTTGCAGATTCTGCTTGGGTTCAAGTTTTGCCAATGACACGATTTCATCAGCCCAATTCGTCAGAGACTCTCAGACTGTGAGCTCAAATAACAGTGACTTCAAACTAGGATTTTTCTCCCCTCAGAATTCAACACATCGCTATGTAGGAATCTGGTATCTCTCTGAAAAGAACATTGTCTGGATAGCTAACAGAGACCAACCACTTGAGGATTCTTCTGGGGTTCTCAGTATTTCCCAGGACGGCAACCTCGTGGTATTGAATGGACAAAACCTGGTACTCTGGTCGTCAAACGTGTCAAACAATGCTACAAACGCAACAGCCCAGCTTCAAGATTCTGGGAACCTTGTCCTGCTGGATGACACCACTGGAGAGACATTATGGCAGAGCTTTGAACATCCCTCTGATGCAGCAGTTCCAAAGATGAAGATCAGTGCCAACAGATTCACCGGTAAGAAAATACAGTTCGTGTCATCGAAAAGCGCTTCGGATCCATCTTCTGGGTACTTCACTGGTAGTATTGAACGCCTTGATGTTCCGGAAGTGTTCTTCTGGGTCAATGGAACTCGCCCATATTGGCGAACTGGTCCGTGGAATGGGCGAGTCTTCATCGGATCACCCTTGATGTCCACTGGGTATCTATATGGGTGGACTCTAGTAAATCAGGAAGACGGAACTGTTTATCTAACTTACAGTTTTTTAGACCAAGCTGCTTTTGGAATCCTTTACTTGAACCCACAAGGCAAACTTAGATTGAAGAGGTTCTATAATAAGAAGCAATTTATGGATGACGTACTAGATCAATCAGAATGTGATGAGTACGGCAAGTGTGGGGAATTTGGGAGCTGTAATCAGCAGAGTACGCCGATCTGTAGCTGCTTAAATGGGTTTGAGCCGAAGAAAACAGAGGAATGGAATAGGCAAAACTGGACAAGTGGGTGTGTGAGAAAGTCAGCATTGATGTGTGAGAGCTTAAAGAATGGAAGTAAAGCTGGGGAAGAAGATGGGTTTCTGAAATTTGAGAATATGAAAGTGCCAGATTTTGCAGAGAGGTCTGATGCTGACACAGAAGCCAAATGCGGGACTGAGTGCTCAAAAAATTGCTCCTGTTTGGCATATGCATACGATCCTGGCATTGGATGCATGTATTGGAGTAGAAGCTTGATTGACATACAAAAGTTCTCATTTGGAGGAATTGATCTGTACATTCGTGTGGCCCATTCAGAACTTGGACAAATTTCTGAAAAAAATACAGGCAAGAAAGCGATCATCGCAGTCACAGTGTCAATAGGAACAATTACCTTGGTTGCCTCTGCATGTCTAGTTGTCGTCTGTACCCGTCGCTCTCGGCGGAAAGGGACTCGAAAACTTAGAGAAAATCAGAGTCAAAGAGTGAAGATCAACAAACAAGACAAGCTGGACGAGCTACCTCTAATTGATTTTCAAGTGCTTGCAACTGCTACAAACAACTTTGACTTAGCTAACATGCTAGGGAAGGGTGGTTTTGGCCCAGTCTACAAGGGAACACTGCAAGATGGTCAAGAAATTGCAGTGAAAAGACTGTCCAGAGCATCTGGACAAGGGCTTGAAGAGTTCATGAATGAGGTGGTGGTGATTTCTAAGCTTCAACACCGCAATCTTGTGAGACTTCTTGGTTGCTGCATTGAAGGAGATGAAAAGATGTTAATCTATGAGTTCATGCCAAATAAAAGCTTGGATGCATTTCTCTTTGATCCAATTCAAAGGAAATTACTGGATTGGAGAAAACGATTTAACATAATTGAAGGAATAGCTCGAGGCTTGCTTTATCTTCACAGAGATTCTAGGCTAAGAATAATACATAGAGATTTAAAAGCTAGTAATGTCTTGCTGGATGGGGAAATGAATCCAAAAATATCAGATTTCGGTTTGGCTAGAATTTTTGGAGCCACTGAAGATGAGGTTAATACTAAAAGAGTTGTTGGAACATATGGCTATATGTCTCCAGAATATGCAATGGAGGGATTGTTTTCTGAGAAATCTGATGTGTATAGTTTTGGAGTTTTGTTGTTGGAGGCTATTAGCGGAAGAAGAAACAGTAGCTTCCATAAGGATGAAGAATCTCTTAGCCTTATAGGATTTGCATGGAAGCTATGGAATGAAGAGAAAATTGAATCTTTGGTAGATTCAAATATATGGGATTCAAGCAATGAAAGGCATATTTTGAAGTGCATACACATAGGGCTTCTATGTGTGCAAGAAGTTGCAAAACAAAGGCCAAGCATGACCAATGTAGTAATGATGCTTATCAGTGAGAATGTGCATCTTCCTCCTCCAAAGCAAGTAGCCTTCGTCCACAAGCATTGGTTGTCTGGTTCGGAATCCTCTAATTCTAAGGAACGTCAGTGTAACTCTCTCAACAATGTGACTGTCACTGAGATTCAGGGCAGATAG 2541 0.4211 MPQDDPDDIIHGILESTVLQNMGFRIPLTFINTLLVICRFCLGSSFANDTISSAQFVRDSQTVSSNNSDFKLGFFSPQNSTHRYVGIWYLSEKNIVWIANRDQPLEDSSGVLSISQDGNLVVLNGQNLVLWSSNVSNNATNATAQLQDSGNLVLLDDTTGETLWQSFEHPSDAAVPKMKISANRFTGKKIQFVSSKSASDPSSGYFTGSIERLDVPEVFFWVNGTRPYWRTGPWNGRVFIGSPLMSTGYLYGWTLVNQEDGTVYLTYSFLDQAAFGILYLNPQGKLRLKRFYNKKQFMDDVLDQSECDEYGKCGEFGSCNQQSTPICSCLNGFEPKKTEEWNRQNWTSGCVRKSALMCESLKNGSKAGEEDGFLKFENMKVPDFAERSDADTEAKCGTECSKNCSCLAYAYDPGIGCMYWSRSLIDIQKFSFGGIDLYIRVAHSELGQISEKNTGKKAIIAVTVSIGTITLVASACLVVVCTRRSRRKGTRKLRENQSQRVKINKQDKLDELPLIDFQVLATATNNFDLANMLGKGGFGPVYKGTLQDGQEIAVKRLSRASGQGLEEFMNEVVVISKLQHRNLVRLLGCCIEGDEKMLIYEFMPNKSLDAFLFDPIQRKLLDWRKRFNIIEGIARGLLYLHRDSRLRIIHRDLKASNVLLDGEMNPKISDFGLARIFGATEDEVNTKRVVGTYGYMSPEYAMEGLFSEKSDVYSFGVLLLEAISGRRNSSFHKDEESLSLIGFAWKLWNEEKIESLVDSNIWDSSNERHILKCIHIGLLCVQEVAKQRPSMTNVVMMLISENVHLPPPKQVAFVHKHWLSGSESSNSKERQCNSLNNVTVTEIQGR 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2536 846 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 34 790 - -
Dere02g2536 846 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 491 602 - -
Dere02g2536 846 Gene3D Transferase(Phosphotransferase) domain 1 603 805 - -
Dere02g2536 846 Pfam Protein tyrosine and serine/threonine kinase 529 797 IPR001245 GO:0004672|GO:0006468
Dere02g2536 846 CDD STKc_IRAK 533 798 - -
Dere02g2536 846 Gene3D - 44 167 IPR036426 -
Dere02g2536 846 SUPERFAMILY Protein kinase-like (PK-like) 511 818 IPR011009 -
Dere02g2536 846 SMART ntp_6 368 441 IPR003609 -
Dere02g2536 846 Pfam PAN-like domain 369 427 IPR003609 -
Dere02g2536 846 CDD B_lectin 55 170 IPR001480 -
Dere02g2536 846 PIRSF SRK 20 846 IPR024171 GO:0004674
Dere02g2536 846 ProSiteProfiles EGF-like domain profile. 303 339 IPR000742 -
Dere02g2536 846 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 603 806 - -
Dere02g2536 846 Gene3D Phosphorylase Kinase; domain 1 484 602 - -
Dere02g2536 846 SMART serkin_6 527 800 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g2536 846 SMART blect_4 54 170 IPR001480 -
Dere02g2536 846 Pfam S-locus glycoprotein domain 229 336 IPR000858 GO:0048544
Dere02g2536 846 ProSitePatterns Serine/Threonine protein kinases active-site signature. 648 660 IPR008271 GO:0004672|GO:0006468
Dere02g2536 846 ProSiteProfiles Bulb-type lectin domain profile. 48 167 IPR001480 -
Dere02g2536 846 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 44 167 - -
Dere02g2536 846 Pfam D-mannose binding lectin 95 196 IPR001480 -
Dere02g2536 846 ProSiteProfiles Protein kinase domain profile. 527 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g2536 846 CDD PAN_AP_plant 363 442 - -
Dere02g2536 846 ProSiteProfiles PAN/Apple domain profile. 358 442 IPR003609 -
Dere02g2536 846 SUPERFAMILY alpha-D-mannose-specific plant lectins 85 236 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2536 Dere-ChrDere02 27940093 27944859 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2536 450 814 Receptor kinase-like Gene Family AT4G05200 51.892 1.76e-124 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dere02g2536 PK_Tyr_Ser-Thr 1.6e-48 CL0016