Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2535 ATGGTTAGCGTTTTCACTGCCCCATTGTTTCTGCTCTTCTCCTCCTCCTTCTTCTTCTTCTTCTTCGGCCTCTCTTTTCTCGCTCTGTTTTCCCATGCAACCACTTTAAAATCAATCACGCATGGCGAATTGATCACAGACGGCGACACACTTGTATCCAAAGGGTTCAATTTCGAGCTGGGTTTCTTCGGTTTCGATGATTCCCCGCTACGATACGTTGGGATTTGGTACTACAACGTCCCTGAATTGGCTGTGATATGGGTTGCGAACAGAGGAAACCCCATTAAAGACCGAAAAGGGGCTATCACAATTGGGAGTGATGGTAACTTGGTTATCTTTGACGGGGAAAATAACGCAGTCTGGTCTAGTAATGTGTCAGTCCCACAGAACAACTCGCAAGTTATTCTCCGCGACGATGGAAATCTTGTTCTTTCGAGTAGGTTTGATAGCAAAGAGATATGGCAGAGCTTTAAGGACCCAACAGATACATTTCTTCCAGGTATGGTTGTGCCTGTGAATGCTTCCATGGGAGAGTTAGGCTCTTTTATTTCGTGGAAATCTGCTGATGATCCTTCACCGGGAAACTACACAATGGGGGTTGATCCCGGGGCATCACCCCAGATAGTGATTTGGAAAGGAGGCAAAAGGAGATGGAGAAGTGGGTATTGGGATGGTAGAATATTTACAGGCGTGTCAAATATGACAGGTAGTTATCTCTTTGGTTTTAGACTCAACGGAGATGATGACCAAGGGAGGTATTTTACATATAGTCCTTTGAGCAACTCTGACAAGGTCAGGTTTCAGATAGGATGGGATGGGCATGAAAGGCAGCTCAAGTGGAATGAAGATGAGAAAAAATGGACTGCTACACAAACTGAGCCTTTTAATGATTGTGAGCTTTATAACAGGTGTGGGAGTTTTGGGGTATGTAGTTTATCCACTTCACCCATCTGTAGTTGCATAAAAGGGTTTGAACCAAAGGATTGGGATCAGTGGAATAATAGGAATTGGTCAGGTGGGTGTAAAAGGAGAACCCCGTTAAAGGCTGAGACGAATGCTGGTAATGGAACAGAGAAAAATATTGGAGAAGATGGATTCTTGATGTTCAGGTGTATGAAATTGCCAGATTTTGCGACTTTGGTGGTTGATGGTGGCTCTGGCATTGGCACTACCGTAGAGGATTGTGAGAATCATTGTTTGCCAAATAGTAATTGTACTGCATATGCAAACGTTATTGGAATTGGGTGCTTGATTTGGACCAGAGAGTTAGTCGATATTCAGAAATTTGATAATGGAGGAAGCATGCTGTTTATCCGCCTCGCTGCTTCTGATTTAGGTAATATGAATAAAAAGACCAAGGTGGTGATAATAGCAGCAGTTCTGGCCGGAATAATCTGCCTAGGACTGTGTGTGTGGCTGGCATGTATATTCAAGAGAAAACGCGACGCTTCAAGTTGCAAGGATGCTGATATTCCTGTGTTTGTTACAAACAAAAGTAGAGACTCTTCGGCAGAAATTTCGGGATCAATTGACTTAAGTTTGGAAGGGAATCAAGTAAGCGGCCCAGAACTGCCATTCTTTAATTTCAATTGCATTGCAAGAGCCACCAACAATTTTTCAGAAGAAAATAAGCTTGGGCAAGGGGGATTTGGTCCTGTCTATAAGGGAAAGCTTCCAAGTGGAGAACAAATAGCAGTCAAGAGACTTTCAAGACGGTCTGGCCAAGGGTCAGAGGAGTTCAAGAATGAGATGTTACTAATAGCCAAACTACAACATAGAAATCTGGTTAGATTAATGGGATGTTCCATCCTAGAGGAGGAGAAGTTGCTGGTATATGAATATATGCCAAACAGAAGCTTGGATTGTTATTTATTTGACCCAGTTAAGCAAAAACAACTAGACTGGCAAAAAAGATTTGAAATCATTGAAGGCATTGCAAGAGGCCTACTTTATCTGCACCGGGATTCTAGACTTAGAATTATACATCGAGATTTAAAAGCAAGTAACATTTTGTTGGATGAAAACATGAACCCCAAAATTTCAGACTTTGGCTTAGCCAGAATATTTGGAGGAAACCAGATTGAAGCCAGCACAACTAGAGTGGTTGGAACATATGGCTATATGGCCCCAGAATATGCAATGGAAGGTCTCTTTTCAGTAAAATCTGATGTCTATAGTTTTGGTGTATTACTACTTGAGATTGTCAGTGGCCGTAAGAACACTAGCTTCCGTGATACGGATGACTCAAGTCTCATAGGATATGCATGGCATCTTTGGAATGAACAAAGAGCAACGGCGCTCGTGGATCCTTCAATCCGAGAATCAACTCCCAGAAATAAAGCTTTGAGATGGATACACATTGGGATGTTATGCGTGCAAGATTCTGCAGCTCACAGGCCAACCATGTCTTCTGTGGTGTTGATGTTGGAGAGCGAAACCACAACTCTTCCCTGTCCGAGGCAACCTCTGCTTACTTCCATGAGAGCTGAAGACAGAGAATTTTATTCGGACGGCCTTGATGCTTCCACAAATGGTTTGACAGTCACTATGGCTGTAGGCAGATAG 2565 0.4292 MVSVFTAPLFLLFSSSFFFFFFGLSFLALFSHATTLKSITHGELITDGDTLVSKGFNFELGFFGFDDSPLRYVGIWYYNVPELAVIWVANRGNPIKDRKGAITIGSDGNLVIFDGENNAVWSSNVSVPQNNSQVILRDDGNLVLSSRFDSKEIWQSFKDPTDTFLPGMVVPVNASMGELGSFISWKSADDPSPGNYTMGVDPGASPQIVIWKGGKRRWRSGYWDGRIFTGVSNMTGSYLFGFRLNGDDDQGRYFTYSPLSNSDKVRFQIGWDGHERQLKWNEDEKKWTATQTEPFNDCELYNRCGSFGVCSLSTSPICSCIKGFEPKDWDQWNNRNWSGGCKRRTPLKAETNAGNGTEKNIGEDGFLMFRCMKLPDFATLVVDGGSGIGTTVEDCENHCLPNSNCTAYANVIGIGCLIWTRELVDIQKFDNGGSMLFIRLAASDLGNMNKKTKVVIIAAVLAGIICLGLCVWLACIFKRKRDASSCKDADIPVFVTNKSRDSSAEISGSIDLSLEGNQVSGPELPFFNFNCIARATNNFSEENKLGQGGFGPVYKGKLPSGEQIAVKRLSRRSGQGSEEFKNEMLLIAKLQHRNLVRLMGCSILEEEKLLVYEYMPNRSLDCYLFDPVKQKQLDWQKRFEIIEGIARGLLYLHRDSRLRIIHRDLKASNILLDENMNPKISDFGLARIFGGNQIEASTTRVVGTYGYMAPEYAMEGLFSVKSDVYSFGVLLLEIVSGRKNTSFRDTDDSSLIGYAWHLWNEQRATALVDPSIRESTPRNKALRWIHIGMLCVQDSAAHRPTMSSVVLMLESETTTLPCPRQPLLTSMRAEDREFYSDGLDASTNGLTVTMAVGR 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2535 854 ProSiteProfiles PAN/Apple domain profile. 341 441 IPR003609 -
Dere02g2535 854 SUPERFAMILY Protein kinase-like (PK-like) 524 828 IPR011009 -
Dere02g2535 854 SMART serkin_6 539 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g2535 854 SMART blect_4 42 160 IPR001480 -
Dere02g2535 854 ProSitePatterns Serine/Threonine protein kinases active-site signature. 660 672 IPR008271 GO:0004672|GO:0006468
Dere02g2535 854 SUPERFAMILY alpha-D-mannose-specific plant lectins 85 191 IPR036426 -
Dere02g2535 854 Gene3D Transferase(Phosphotransferase) domain 1 615 817 - -
Dere02g2535 854 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 615 817 - -
Dere02g2535 854 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 505 614 - -
Dere02g2535 854 ProSiteProfiles Protein kinase domain profile. 539 824 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g2535 854 Pfam PAN-like domain 362 426 IPR003609 -
Dere02g2535 854 Pfam D-mannose binding lectin 85 186 IPR001480 -
Dere02g2535 854 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 24 800 - -
Dere02g2535 854 Pfam S-locus glycoprotein domain 218 327 IPR000858 GO:0048544
Dere02g2535 854 Gene3D Phosphorylase Kinase; domain 1 510 614 - -
Dere02g2535 854 CDD PAN_AP_plant 358 441 - -
Dere02g2535 854 CDD STKc_IRAK 545 810 - -
Dere02g2535 854 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 31 157 - -
Dere02g2535 854 Gene3D - 32 157 IPR036426 -
Dere02g2535 854 Pfam Protein tyrosine and serine/threonine kinase 542 807 IPR001245 GO:0004672|GO:0006468
Dere02g2535 854 PIRSF SRK 7 854 IPR024171 GO:0004674
Dere02g2535 854 SMART ntp_6 361 440 IPR003609 -
Dere02g2535 854 ProSiteProfiles Bulb-type lectin domain profile. 36 157 IPR001480 -
Dere02g2535 854 CDD B_lectin 43 160 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2535 Dere-ChrDere02 27928902 27932450 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2535 452 822 Receptor kinase-like Gene Family AT4G23230 53.226 1.44e-129 400
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dere02g2535 PK_Tyr_Ser-Thr 2e-49 CL0016