Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2534 ATGGGAGGTTTTCCTAACCTCCTCTGTATCTACCTCTTCCGGGTAGTCTTCTTCTCCTTCACCCTACTCACTTTCTTCTCCACAGTCTCAATCTCAGTCGATACCTTAACTGCTACCCAATCTCTCGGAACCAACCAAACCCTTATATCACCGAAGCAAATTTTCGAGCTGGGTTTCTTTACTTCAAGCAATTCCAAATGGTTTCTGGGTATATGGTACAAGAACATTAAGGTTAAAACAGTGGTTTGGGTCGCCAACAGAGACAACCCCCTCGAGAATCCCTCTGGAATTCTCAAGATCGGAGACAGGGGAAACATTGTTCTTCTCGATCAAACAGGAAATCCCATATGGTCCTCGAATCGGACCACAGCTTCGACTTCAAATCCTGTTCTTCAACTTTTAGATTCGGGGAATTTGGTTCTGAAAGAAGAGAACCAGAACGACCCCACAAAGTATCTATGGCAGAGCTTCGATTACCCCACGGATACTCTGTTACCAGGCATGAGATTGGGCTGGAACTTCGACACCGGTACGGAGAGACACATAACGGCGTGGAAGGTCACCGGAGAAGATCCGTCCACTGGCGATTTCTCTTTCAAGCTTGATTACCGAGGCCTCCCACAAATCTACCTGACAAACAAACAGAAAAAGTTATACCGAAGTGGGCCCTGGAATGGCGAGAGATTCAGCGGAGTACCGGAGATGCAACCCGGTACAGATTCCATCAAGTTCATCTTTTTCACTGGCGAACACGAAGTTTACTACACTTTCTCAATTGGGAACCAGTCGTTGTTCTCGAGGCTCACTGTGAACTCCGTTGCCGGCGAGCTTCAAAGGCTGACGTGGATCGAGAGCACCCAGGTTTGGACCAAATTCTGGTACGCTCCGAAGGACCAATGCGATTACTACAGACAGTGCGGTCCGTTCGGTGTCTGTGATGCGAATGCTTCCCCGGTGTGCAAGTGTATGAGAGGGTTCACGCCGAAGAACTTGCAGGCGTGGAATCTGAGAGATGGGTCTGATGGGTGCGTGAGGAAAACAGAGCTGGACTGTGGGGGAGACAAGTTCCTGGAGGTGCTGAATGTGAAGCTGCCGGAGACAACCTCGGTGTTCGTGAACAGGAGCATGAACCTTGTGGAATGTGGGGATCTGTGTCACAGGAATTGTTCCTGCACTGCTTATGCTAACATAGAGGTCACCAATGGCGGAACTGGGTGCGTCATGTGGGGTGGTGACCTCTTGGACATAAGGCAGTACCCTCAGGGTGGACAGACTCTGTATGTCAGATTAGCAGCTTCTGATGTAGGCTCTGCAAGTGGTTCTCACAAGATAGCTAAGGTTGTAGGAATTGCAGTTGCTGCAGCTATCATACTTCTAGGATTGGGTCTCTTTTTCTTACGGAAGAGGAAGAAATTGCAAAGCTTATTGAAAGGGAAGAAAGAATACAGAGGCACTCTAGAGAGAAGTCAAGATTTGTTAATGACTGAGGCTGTGATTTCAAGTAACAGAGAACACTCATTTGAAAGGAACAATATGGATGACATAGAGTTGCCATTATTTGATTTTAATACTATAATAATGGCAACAGACAACTTTTCTGAATCAAATAAACTTGGTCAGGGTGGCTTTGGTAGTGTTTACAGGGGCAGGTTGGTGGATGGACAAGAAATTGCTGTCAAGAGGCTGTCAAAAAGCTCTGGGCAAGGAATTGAAGAGTTCAAGAATGAGGTCAAGTTAATTGTTAGGCTTCAACACAGAAATCTTGTTCGGTTGTTTGGTTGCTGCATTGAGATAGATGAGAAGATGCTAATTTATGAATACTTGGAAAACAGAAGCCTTGATTCCATTCTGTTTGATAAAACAAAAAGATCATTGTTGGACTGGCACACACGCTTTAACATCATATGTGGAATAGCTAGAGGTCTTCTTTATTTACACCAAGATTCCAGGTTTAGGATTATCCATAGAGATCTCAAGGCAAGCAACGTTCTACTTGACAGAGAAATGAACCCAAAGATATCTGACTTTGGGATGGCTAGAATCTTTAGCAAAGATCAAACTGAGGCAAATACAATGAGAATTGTTGGAACATATGGTTATATGTCCCCTGAGTATGCCATGGACGGGCACTTCTCAGTGAAATCTGATGCTTTTAGTTTTGGGGTTTTGGTGCTAGAGATCATAAGTGGCAAGAAGAACAGAGGATTTTATTACTCAAACAATGAACTGAATCTTCTCGGCCATGCTTGGATGCTGTGGAAAGAAGGAAATGCTTTGGAATTAATAGATTCATCGATTGGTGATTCATATGTGGCATCTGAAGTTCTTAGATGCATACAGGTTGCACTCCTGTGTGTCCAAGAGCGTGCAGAAGATAGGCCAACAATGTCTACTGTAGTGTTGATGCTGAGTAGTGAAACTGCAACAATGGCACAACCCAAAAACCCTGGATTTTGCCTTGGGAGGAATCCTATTGAAACTGATTCTTCTTCAAGCAAGCAAGAAGAATCATGCACCGTGAACCAAGTCACAGTGACAATGCTAAATGCCAGGTAG 2556 0.4484 MGGFPNLLCIYLFRVVFFSFTLLTFFSTVSISVDTLTATQSLGTNQTLISPKQIFELGFFTSSNSKWFLGIWYKNIKVKTVVWVANRDNPLENPSGILKIGDRGNIVLLDQTGNPIWSSNRTTASTSNPVLQLLDSGNLVLKEENQNDPTKYLWQSFDYPTDTLLPGMRLGWNFDTGTERHITAWKVTGEDPSTGDFSFKLDYRGLPQIYLTNKQKKLYRSGPWNGERFSGVPEMQPGTDSIKFIFFTGEHEVYYTFSIGNQSLFSRLTVNSVAGELQRLTWIESTQVWTKFWYAPKDQCDYYRQCGPFGVCDANASPVCKCMRGFTPKNLQAWNLRDGSDGCVRKTELDCGGDKFLEVLNVKLPETTSVFVNRSMNLVECGDLCHRNCSCTAYANIEVTNGGTGCVMWGGDLLDIRQYPQGGQTLYVRLAASDVGSASGSHKIAKVVGIAVAAAIILLGLGLFFLRKRKKLQSLLKGKKEYRGTLERSQDLLMTEAVISSNREHSFERNNMDDIELPLFDFNTIIMATDNFSESNKLGQGGFGSVYRGRLVDGQEIAVKRLSKSSGQGIEEFKNEVKLIVRLQHRNLVRLFGCCIEIDEKMLIYEYLENRSLDSILFDKTKRSLLDWHTRFNIICGIARGLLYLHQDSRFRIIHRDLKASNVLLDREMNPKISDFGMARIFSKDQTEANTMRIVGTYGYMSPEYAMDGHFSVKSDAFSFGVLVLEIISGKKNRGFYYSNNELNLLGHAWMLWKEGNALELIDSSIGDSYVASEVLRCIQVALLCVQERAEDRPTMSTVVLMLSSETATMAQPKNPGFCLGRNPIETDSSSSKQEESCTVNQVTVTMLNAR 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2534 851 SMART blect_4 39 160 IPR001480 -
Dere02g2534 851 CDD STKc_IRAK 538 803 - -
Dere02g2534 851 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 29 157 - -
Dere02g2534 851 PIRSF SRK 6 851 IPR024171 GO:0004674
Dere02g2534 851 Pfam Domain of unknown function (DUF3403) 805 851 IPR021820 GO:0004674
Dere02g2534 851 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 19 794 - -
Dere02g2534 851 ProSiteProfiles Protein kinase domain profile. 532 818 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g2534 851 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 497 607 - -
Dere02g2534 851 CDD PAN_AP_plant 347 431 - -
Dere02g2534 851 SUPERFAMILY alpha-D-mannose-specific plant lectins 80 226 IPR036426 -
Dere02g2534 851 Gene3D Phosphorylase Kinase; domain 1 493 607 - -
Dere02g2534 851 Gene3D - 27 157 IPR036426 -
Dere02g2534 851 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 608 811 - -
Dere02g2534 851 CDD B_lectin 39 160 IPR001480 -
Dere02g2534 851 Pfam Protein tyrosine and serine/threonine kinase 535 801 IPR001245 GO:0004672|GO:0006468
Dere02g2534 851 Pfam D-mannose binding lectin 80 186 IPR001480 -
Dere02g2534 851 ProSitePatterns Protein kinases ATP-binding region signature. 538 560 IPR017441 GO:0005524
Dere02g2534 851 SMART serkin_6 532 803 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g2534 851 Pfam S-locus glycoprotein domain 219 330 IPR000858 GO:0048544
Dere02g2534 851 Pfam Receptor serine/threonine kinase 487 522 IPR022126 GO:0004674
Dere02g2534 851 ProSiteProfiles Bulb-type lectin domain profile. 33 154 IPR001480 -
Dere02g2534 851 ProSiteProfiles PAN/Apple domain profile. 351 431 IPR003609 -
Dere02g2534 851 SUPERFAMILY Protein kinase-like (PK-like) 511 803 IPR011009 -
Dere02g2534 851 ProSitePatterns Serine/Threonine protein kinases active-site signature. 653 665 IPR008271 GO:0004672|GO:0006468
Dere02g2534 851 SMART ntp_6 351 430 IPR003609 -
Dere02g2534 851 Gene3D Transferase(Phosphotransferase) domain 1 608 816 - -
Dere02g2534 851 Pfam PAN-like domain 351 416 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2534 Dere-ChrDere02 27908436 27914813 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2534 520 851 Receptor kinase-like Gene Family AT4G11530 59.644 6.27e-138 423
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dere02g2534 PK_Tyr_Ser-Thr 5.6e-47 CL0016