Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2531 ATGGCTGAGGAGTTTGAAGCTGGGATTTGTGGTGGGAATTGGTGGAATATTAATAATTCATCGAGAAGTGTATTCCCTCTCAGCTCATCGTCGCTCTGTTCTATTGCAGCTAACAACGATGGAGGGAACTATAGTTCTTGGCAAACTGATTATCTGGTGGATCTGAAGCTGCCCATAAGGTCCAGTGAAGGACTGGTTTCTGATAATTCTCTGGGTTTTCTTGATGAACAGAAGCCAAAGCAGAGTGAATCATCATCATCAGCTAGTGGAAATGGAAGCATTTTGATGGATTCCTCCTTGCAAATGATGGGTTTTGGCCTCCCTTCTTCATCAACCACTTCATCCAACTGGAATAACCAGTCTCTATTTGGAAGACCAGAAAGCAATTTCCATTCTGTGCTTGAAGAAGAAGCGGGGATAGATTCTTCTAACTCAGAAACGATCCAGAAGGATTGGAGCCCAAAGACCCAAGTTTCCTCCATTAACGATGCTTTCAAGCCTATGAATCAAGAATTTTCCTTAGATCTACAGAGTCTGAGTTACCTATATGATGAACATAATCCTCTTCATCCTCATCCACATCCACAACCACAACCACTACCACAGGACTCACTTTTCACCAACCAGTCTGTGGCTTATAGTCATAATAATTCATCCAATGATCTTTCACCAACTTGGTCTAAAGCCTCTCCCTTTTTGAAGCCTTCAATGCCAAAGCAGCAGCTTAGTGGATTCCACTTTTCCAACAATAATACTCCTTTTTGGAATAATACTTCAGCTCAAGCACTTGGTGACGTACGAGCAGATGTTTTTGCTTCAACCCCACAGTCTCAAGCATTTGAACAGAAACCCAATTGCTCAACTCTCATAACCAAGCACAAGAGAGAAGAGGCTCCTATTGGTGAATCAGCATTCAAAAGGCCAAGAATTGAAACCCCATCACCATTGCCAACTTTCAAGACCGACACAGCATCTGTTCTTCACGAAGCTATCGAGTACATCAAGTATCTTCATGATCAAGTCAGCTTCTTGAGTGCTCCATATTTGAACAGCGGAACTCCCATCCAACATCAGCAGCTCTCTCATGAGGTAGCTGGAGAAGATGAACTAAGCCAAAGAGACTCGGGCAAAACTGATGTAATTACTATTTTCAAAAGGAAGAAGCAGACGTGGAAGCCGCCATTGGTGAGGAAAAAGAAGGAAAGAGAAAGAAGAGGAAAGAACAGTTACCCTTTAGAAAGAAGGACAGGGAATGCTAGCTGGGCCAGGGCACATTGCACATCCTTGTAG 1290 0.431 MAEEFEAGICGGNWWNINNSSRSVFPLSSSSLCSIAANNDGGNYSSWQTDYLVDLKLPIRSSEGLVSDNSLGFLDEQKPKQSESSSSASGNGSILMDSSLQMMGFGLPSSSTTSSNWNNQSLFGRPESNFHSVLEEEAGIDSSNSETIQKDWSPKTQVSSINDAFKPMNQEFSLDLQSLSYLYDEHNPLHPHPHPQPQPLPQDSLFTNQSVAYSHNNSSNDLSPTWSKASPFLKPSMPKQQLSGFHFSNNNTPFWNNTSAQALGDVRADVFASTPQSQAFEQKPNCSTLITKHKREEAPIGESAFKRPRIETPSPLPTFKTDTASVLHEAIEYIKYLHDQVSFLSAPYLNSGTPIQHQQLSHEVAGEDELSQRDSGKTDVITIFKRKKQTWKPPLVRKKKERERRGKNSYPLERRTGNASWARAHCTSL 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2531 429 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 316 351 IPR036638 GO:0046983
Dere02g2531 429 MobiDBLite consensus disorder prediction 185 204 - -
Dere02g2531 429 MobiDBLite consensus disorder prediction 391 429 - -
Dere02g2531 429 CDD bHLH_AtbHLH_like 316 345 IPR045239 -
Dere02g2531 429 MobiDBLite consensus disorder prediction 213 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2531 Dere-ChrDere02 27819797 27823547 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2531 1 352 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G61660 31.347 7.17e-28 112