Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2523 ATGAGAGGTGGAGTGGGAAAGATCGTGGAGGTCCAAAGAGGTTACATTGTTCGCTCCACGGGACGCAAAGATAGTCACAGCAAGGTGTGTACAACCAAGGGACCTAGAGATCTGCGAGTTCGTCTCTTCGCCCACACAACCATTCAATTCTATGATGTTCAAGACCATCTCGACTACGACCAACACAGTAAAGCTATCAATTGGCTCATCAAGAATGCCAAAGCCGCCATAGAGCTCGCAGAGCTTCCTGTTTGGAACCCCAATATAGTGAACCCAAATGCCCACCAAGCAGTGAAGGAGAACTGA 306 0.4869 MRGGVGKIVEVQRGYIVRSTGRKDSHSKVCTTKGPRDLRVRLFAHTTIQFYDVQDHLDYDQHSKAINWLIKNAKAAIELAELPVWNPNIVNPNAHQAVKEN 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2523 101 ProSiteProfiles TCP domain profile. 22 80 IPR017887 -
Dere02g2523 101 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 18 90 IPR005333 GO:0003700
Dere02g2523 101 Pfam TCP family transcription factor 21 79 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2523 Dere-ChrDere02 27669242 27669547 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2523 3 87 TCP Transcription Factor Family AT3G15030 75.581 1.70e-39 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Dere02g2523 TCP 1.8e-22 No_clan