Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2521 ATGTCTTTCCTTGATTGTTCACTTTCCTATGAAATTGGAGATATTACGCATATTTCATCTCTCAAAGCCTTTCGAAGGTTAATTGAACCTTTGAGAGCAAAAGGAAAACTGAGGAAGAAGAAGAAGAAGAAGAAGATGCCTGAGGATTTGTGGCTTTCTCTGAAGAGATCACTTCACTGCAAACCAAAACCATCAGAAGTTCATGATCCAAAAGCAATTACCCAGCAAAAAATTTCTCAGAGTAATTCAAATACAAAAGATTTCATCCTCGGAAGAAGCAAAATGCACTCTGAGAAACCCAAGAGTTGCAGCCCAATGAAATCTCAAAGGAGCAATGACATCCTCAACCCCATAACCCATGAAGTTGTCCTTGACAGCTCCAATGGTGGATTTCGTTTATGCCGATGTTGTCCCTGTCCTTTAAGTAAAGAAATAGATGGCCCTCATAGATCAAGAAGGCCAACAACGACACCTCAAAGGAAAAGCCATCATGTCGATTGCAATGAATGTAACAATCCCTCAAGCCCAAGGGTTTTGGTGCAGACAGATTCTAATAGTGATCCTTCAACTCTCATATGTCACATATGTGGTGAGCAACTAAACTGTGTTGATGCAGTTGAAGCACACCATGTCTCCCAGCATTCAGTTATTGAACTTAATGAAGAAGATTCATCGAGGCAGATCATAGAAACAATATGCAGAACAAGCTGGACTAACTCTGAGACCGAGTCAGGGCACATTGAGACAGTGCTCAAAGTCCAGAACATGCAAAGAACTTCTGCAAGGTTTGAAGAACACAGAGAAACAGTAAAGTTTAATGCCGACAAATTACACGAGAATCAACCTCGTTGTCTAGCTGATGGCAATGAGCTTTTAAGGTTCCATGGCACAACTGTCACATGTTCTCTTGGTACAAATGGTTCTTCTGGTTTGTGCACTTCAAAACACTGTTCAGTGTGTCAGATTCTGAGACATGGGTCCTACACCAACAGGGAATTTCATGGTTTGTTTGGGGTCCTCACCACTTCTACGTGTGGAAAAGCCATTGAATCCATAGGGTCATCTGATTCTGATATTGGACCATCTCTGAGGAATTCTGTGATTGTGTGCAGAGTTATAGCTGGGAGAGTTCTGTATAGTCCTCTGGAAGAAGTCCAAGAAGTGGGTATTTCTGGGTTTGATTCATTGGCTGAGAAGAGAAGCAGCAATTCAGAGATTGAAGAGCTCTATGTGTTGAATCCTAGAGCTATTCTTCCTTGCTTTGTGCGTATCACGTGTACACCTTCTTCATCGGAGTTGAAACAAAGGGACGAAATTAATTCTGAAGTAGCAGACCAGAAAAGGCTATTCAAGATGAAAGCAAGTCTCTTGAACTGTGGATCTTGCCAGTCGTAA 1395 0.4165 MSFLDCSLSYEIGDITHISSLKAFRRLIEPLRAKGKLRKKKKKKKMPEDLWLSLKRSLHCKPKPSEVHDPKAITQQKISQSNSNTKDFILGRSKMHSEKPKSCSPMKSQRSNDILNPITHEVVLDSSNGGFRLCRCCPCPLSKEIDGPHRSRRPTTTPQRKSHHVDCNECNNPSSPRVLVQTDSNSDPSTLICHICGEQLNCVDAVEAHHVSQHSVIELNEEDSSRQIIETICRTSWTNSETESGHIETVLKVQNMQRTSARFEEHRETVKFNADKLHENQPRCLADGNELLRFHGTTVTCSLGTNGSSGLCTSKHCSVCQILRHGSYTNREFHGLFGVLTTSTCGKAIESIGSSDSDIGPSLRNSVIVCRVIAGRVLYSPLEEVQEVGISGFDSLAEKRSSNSEIEELYVLNPRAILPCFVRITCTPSSSELKQRDEINSEVADQKRLFKMKASLLNCGSCQS 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2521 464 SUPERFAMILY ADP-ribosylation 216 428 - -
Dere02g2521 464 MobiDBLite consensus disorder prediction 147 167 - -
Dere02g2521 464 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 51 424 - -
Dere02g2521 464 MobiDBLite consensus disorder prediction 147 170 - -
Dere02g2521 464 Gene3D - 206 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2521 Dere-ChrDere02 27633366 27638808 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2521 182 428 C2H2 Transcription Factor Family AT5G54630 55.731 1.97e-89 278