Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2511 ATGGCATTTCAAACGAAACGTTTTTGGCCATTTCTGATCAGCTTCTGCATATCAATTAGTGACACTAGAGCAGAGCTCGAAAGTAGTGACAGATCTTGCTTAAAATCCATTAGGGACTCCTTCGAAGACCCTCATGACATATTTTCTTCATGGGACTTCGATAATAACACCAAAAGAGGTTCTATATGCCAGTTCTTCGGTGTCACGTGCTGGAACGATAACGAAGATCGAGTCCTTTCTCTAGAACTCCAAAAATGGGGCCTGAAGGGCCAGTTTCCACGAGGGTTCGAAAACTGTACCTCTTTGGTCTCCCTAAACCTTTCGTACAACGGCCTCTCAGGACCCATCCCTTCTGATATATCTGGAAAGCTACCTTTTTTGACCAAACTTGATCTATCACACAACAATTTCTCTGGTCAAATCCCACCGTCCATCTCCAAATGTACTTTCTTGAATACTCTTATGCTTAGCAACAACAGGTTCACTGGTCAAATCCCAGAAGAAATAGGACAGCTTCTTCGTATTAGGAAGTTCAGTGTTGCTAACAATTTATTGTCGGGACCTGTGCCTGTGTTTAGTAAGAATGTTGTTGGTGGGAGAAGCTATGCGAATAACAGTGAACTTTGTGGTGGGACTTTATTGAAGCTTTGTAAACCTGGGCCAAGTACTAGGGCATTTATTGATGATAATATGAACCAGCGGTTTAGGGAGGGATTTATTGTTGGTTATTTCTTCTCTGCAACTTATGTTGTAGTTGTTTTCATGTTTTGTTGTATGCCTTGGAGAAAACTGAAGCAGAAGAAATGGAAAAACATGATAAATAAAGACAAACAAGTGAGAGAATGCCTTTCGTTCATGAAAAGGAACAGGAGGAAGAAGAAAGAGAAGAAAGAAGTGGGACAATGGCTGCCACCTCTTGAGCTCGTCGAGAAAGGAAGCAAAGAGATGTCAGCAATACTGGAAACATTGGTTTCTAAAATGAGCTTCGCAGAACTCTGCAAGGCAACTGATAGTTTCAGTGTAAGAAACACTATTGGGGTGGGAAAGATGGGGATGACGTACAAAGCCAGGCTGCCCAACGGATGGTTCCTGGCAGTGAAGAGACTGTATAACTCTCATTCCTTCAAGAGTCAGTTTGCTTCAGAAATTATGGTTCTGGGAAGATATAGACACAGAAACATGGTCCCACTACTCGGGTTCTGTATCGAAAAAAATGAAAGATTTCTGGTGTACCAATTCATGTCCAATGGAAGACTTCATGATTGGTTAAATCCTTTGGAAAGTGAAGCAAGGAAACAATTTGAATGGCCTCTGAGGGTTAAAATTGCCCTTGGGATAGCAAGAGGCCTATCTTGGCTCCACCATAGTTGTGACATGCACGTAGCTCATTTTAGTATAAGCACAGAGTGCATCTTGCTAGATCAGAATTATGAGCCCAAGATATCCAACTTTGGAGAGGCCAAATTTATGGATCAAAATGTTGATGAGCTTAGCTTTATGAAGAAGGATGTGCATGACTTTGGAATTGTGCTATTTGAGCTGATAATTGGTACGAAGTTTAAAGAAATGGCTAACTCTATCGAGAGTAATGGATGCTCTTTTGCCACTTATTTTGGTAACCTCTCGTCCAGTAACTTTACTGGTTTCTTGGATGCCATTGATGAATCTCTAATTGGGAAAGGATTTGAGAACGAAATACTTACTCTTCTCAGATTTGCATGTGACTGTGTTCAAGTTCAACCCTTTATGGACCAAGTACCAACGATGCTTGAAATTTACAATAAAATGTGCAGCGTTTGGGATGGATAG 1809 0.4107 MAFQTKRFWPFLISFCISISDTRAELESSDRSCLKSIRDSFEDPHDIFSSWDFDNNTKRGSICQFFGVTCWNDNEDRVLSLELQKWGLKGQFPRGFENCTSLVSLNLSYNGLSGPIPSDISGKLPFLTKLDLSHNNFSGQIPPSISKCTFLNTLMLSNNRFTGQIPEEIGQLLRIRKFSVANNLLSGPVPVFSKNVVGGRSYANNSELCGGTLLKLCKPGPSTRAFIDDNMNQRFREGFIVGYFFSATYVVVVFMFCCMPWRKLKQKKWKNMINKDKQVRECLSFMKRNRRKKKEKKEVGQWLPPLELVEKGSKEMSAILETLVSKMSFAELCKATDSFSVRNTIGVGKMGMTYKARLPNGWFLAVKRLYNSHSFKSQFASEIMVLGRYRHRNMVPLLGFCIEKNERFLVYQFMSNGRLHDWLNPLESEARKQFEWPLRVKIALGIARGLSWLHHSCDMHVAHFSISTECILLDQNYEPKISNFGEAKFMDQNVDELSFMKKDVHDFGIVLFELIIGTKFKEMANSIESNGCSFATYFGNLSSSNFTGFLDAIDESLIGKGFENEILTLLRFACDCVQVQPFMDQVPTMLEIYNKMCSVWDG 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2511 602 ProSitePatterns Protein kinases ATP-binding region signature. 345 367 IPR017441 GO:0005524
Dere02g2511 602 ProSiteProfiles Protein kinase domain profile. 339 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g2511 602 Gene3D Transferase(Phosphotransferase) domain 1 414 599 - -
Dere02g2511 602 Pfam Leucine Rich Repeat 127 148 IPR001611 GO:0005515
Dere02g2511 602 SUPERFAMILY Protein kinase-like (PK-like) 319 528 IPR011009 -
Dere02g2511 602 Gene3D Ribonuclease Inhibitor 27 219 IPR032675 -
Dere02g2511 602 Gene3D Phosphorylase Kinase; domain 1 306 413 - -
Dere02g2511 602 FunFam Leucine-rich repeat receptor-like protein kinase 27 191 - -
Dere02g2511 602 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 80 592 - -
Dere02g2511 602 Pfam Leucine Rich repeat 98 114 IPR001611 GO:0005515
Dere02g2511 602 Pfam Leucine rich repeat N-terminal domain 28 71 IPR013210 -
Dere02g2511 602 Pfam Protein kinase domain 340 495 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g2511 602 SUPERFAMILY L domain-like 28 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2511 Dere-ChrDere02 27491140 27493748 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2511 11 581 Receptor kinase-like Gene Family AT3G28450 35.343 9.74e-104 324
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Dere02g2511 Pkinase 2.5e-20 CL0016