Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2496 ATGGTCGCCGGAGGAATACTCCGTCAATGGTCGGCACCCATTGTTCTTCTTGCTCTGTTTTCTCTGTGCCTCGTTACTTCAGCTCAGTCTGAGGAGTTTCGAGTACTTACGAAGTTCAAGTCCTCAATCCATAGTCCAAATGGAGATATTTTCAGTTCGTGGACACAAGCCAATTCTGTGTGCAACTTCACTGGGATTGTTTGCTATTCCAATGGGTTTGTCTCAGAAATCAATCTTGCCCAAAAACAACTAGTGGGTACTATTCCTTTTGACTCAATTTGTGAGCTTCAAATGCTTGAGAAAATGTCACTGGAGGCCAACTTCTTGGGTGGAGTAATTAGTGAGGACTTGAGGAACTGCACCAATTTGAAATATTTAGATTTGGGTGGGAATTCATTTTCCGGGGTGGTGCCTGATTTGTCTACTTTGAACAAGTTGGAGTACTTGAATTTAAATGCAAGTGGAATTTCTGGGGCATTTCCATGGAAATCATTGGAGAATCTAACTAGTCTCGCCTTCTTAAGCCTTGGGGATAACCTACTGGAGAGAAGGCCTTTTCCTGTGGAGGTTTTGAAGCTTGAGAAATTGTATTGGCTTTACCTTACAAATTGCAGCATCACAGGGAAAATCCCATTGGATATTGGAAATCTCACTGTGCTTGAGCATCTTGAGCTTTCTGATAACCAATTGTATGGTGAAATTCCTGTTGATATTGTGAAGCTTCAGAAACTCCGGGTACTTGAGTTATATGACAACTTCTTGAGGGGAAAAATCCCAATTGGGTTTGGGAACCTTACTAGTCTTGTGCAATTTGATGCTTCTAATAATCAACTTGAAGGTGATCTTTCTCAGCTAAAGTCCTTGACTAGCCTTGCTTCTCTTCAGCTTTTTCAGAATAAATTCTCTGGAGGAATCCCACAAGAGCTTGCTGATCTCAAAAACCTTTCAGAAATATCACTTTATGATAACAAGCTCACGGGCTTTCTACCTCAAAATCTTGGCTCATGGGGACGCTTAGACTTCATTGATATTTCGGATAATTTTCTTTCAGGTCCTATACCACCTTACATGTGCAAGAATAACAAAATGACGGACCTATTAATGTTGAACAACAGTTTCAGTGGGAGCATACCAGAAACATATGCAAACTGCTTGTCTTTGGGTCGTTTACGTGTAAATAAAAATTCTCTTTCAGGTATTGTGCCTTCTGGTATATGGGGCTTGCCAAATTTGGAAATTATTGATCTTTCGAATAATCAATTTGAAGGTCCACTATCATCAGACATAGCCAAAGCAAAATCTCTAGCCCAACTATTCTTATCTAACAATCAGTTTTCAGGTGAGTTACCATTGACACTCTCAGAAGCTTCTTCTTTAGTATCAATTCAGTTAAGTTCAAATCATTTTTCTGGTCATCTCCCTGAAACAATTGGCCAGTTAAAGAAACTCAGTAGTCTTAGATTGAGTGGGAACAATTTTTCTGGCATTGTACCACTGTCACTAAATTCATGTCTTTCTCTTAGTGAAATAGACCTATCTTGTAATTCTCTATCTGGGGAAATCCCAGCTAGTCTTGGCTCTCTGCCTACTCTCAATTCACTGAACTTATCCTCAAATGCACTTTCTGGTATAGTTCCATCAAGCTTGTCATGGACGAGACTTAGCCTTCTTGATTTATCAAATAATCAGTTGTTTGGTCCCATACCAGAATCACTTTCTATTCCAGCATTCAAAGATGCGTTTGAAGGGAACCCTGGCTTATGCAGCCAAACTTTGGAAAACTTCAAGCCGTGCTCATTGGATTCTTCTAGCTCCAAGCGAACCCGAATCCTCATCCTCTATTTCATTATTGCTGGTATATTGGTTCTACTTGTATTTTTAGTATGTTTCCTCTTTGTCACACTAAAGCAAAACAAGCTTAAGAAACAATTGAGGACTAGTTCTTGGGACTTGAAGCAGTACCATATGCTAAACTTCAATGAAAATGAGATCACTGAGGGGATCAAAGTTGGGAATTTGATTGGAAAAGGGGGCTCAGGGAATGTTTACAAGGTTGTACTTAGAAGTGGAAAGGAATTGGCTGTCAAACACATATGGAGTTCAAACCCAGGTGACCGGAGAAGTTGCCAGACAAGCTCGGCTATGCTAAGAAGAAATTCCCAGTCACCAGAGTATGATGCAGAGGTGGCCACCCTGAGCTCCATAAGGCATGTGAATGTGGTGAAGCTCTACTGTAGCATCACAAGTGAAGATAGTAGCCTGCTTGTTTATGAGTTCTTACCAAATGGGAGCTTGTGGGACAGGTTGCATTGCTGTGAGAAGAGTAAGCTGGGGTGGGAGGTTAGGTATGAGATTGCATTGGGGGCTGCAAAAGGTTTGGAGTATCTGCACCATGGATACGAAAGACCAATCATACACAGGGATGTTAAATCCAGTAACATATTGCTAGATGAGGAATGGAAGCCAAGGATTGCTGACTTTGGGCTTGCCAAGATTGTGCAAGGAGGAGCAGGCAATTGGACTCATGTCATTGCTGGAACACTTGGATACATGGCTCCTGAGTATGCCTACACTTGTAAGGTGACTGAGAAGAACGATGTGTATAGTTTTGGGGTAGTTCTTATGGAGTTGGTGACAGGGAAGAGGCCTATTGCCCGAGAGTTTGGAGAGAACAAGGACATTGTCTACTGGGTATGCAGCAACATCATGAAGAGCAGAGACCACTTGCTTCAGTTGGTGGATTCCACCATTTCTATGCATTTCAAAGAAAATGCCATAAAGGTTCTGAGGATCGCTATGCTTTGCACTGCAAAAATTCCAGCTTCAAGACCTTCCATGAGAATGGTTGTTCATATGCTGGAAGAGGCAAATCCTTATGCTTTACCAACTATGACAATTGATGGTTAA 2907 0.4142 MVAGGILRQWSAPIVLLALFSLCLVTSAQSEEFRVLTKFKSSIHSPNGDIFSSWTQANSVCNFTGIVCYSNGFVSEINLAQKQLVGTIPFDSICELQMLEKMSLEANFLGGVISEDLRNCTNLKYLDLGGNSFSGVVPDLSTLNKLEYLNLNASGISGAFPWKSLENLTSLAFLSLGDNLLERRPFPVEVLKLEKLYWLYLTNCSITGKIPLDIGNLTVLEHLELSDNQLYGEIPVDIVKLQKLRVLELYDNFLRGKIPIGFGNLTSLVQFDASNNQLEGDLSQLKSLTSLASLQLFQNKFSGGIPQELADLKNLSEISLYDNKLTGFLPQNLGSWGRLDFIDISDNFLSGPIPPYMCKNNKMTDLLMLNNSFSGSIPETYANCLSLGRLRVNKNSLSGIVPSGIWGLPNLEIIDLSNNQFEGPLSSDIAKAKSLAQLFLSNNQFSGELPLTLSEASSLVSIQLSSNHFSGHLPETIGQLKKLSSLRLSGNNFSGIVPLSLNSCLSLSEIDLSCNSLSGEIPASLGSLPTLNSLNLSSNALSGIVPSSLSWTRLSLLDLSNNQLFGPIPESLSIPAFKDAFEGNPGLCSQTLENFKPCSLDSSSSKRTRILILYFIIAGILVLLVFLVCFLFVTLKQNKLKKQLRTSSWDLKQYHMLNFNENEITEGIKVGNLIGKGGSGNVYKVVLRSGKELAVKHIWSSNPGDRRSCQTSSAMLRRNSQSPEYDAEVATLSSIRHVNVVKLYCSITSEDSSLLVYEFLPNGSLWDRLHCCEKSKLGWEVRYEIALGAAKGLEYLHHGYERPIIHRDVKSSNILLDEEWKPRIADFGLAKIVQGGAGNWTHVIAGTLGYMAPEYAYTCKVTEKNDVYSFGVVLMELVTGKRPIAREFGENKDIVYWVCSNIMKSRDHLLQLVDSTISMHFKENAIKVLRIAMLCTAKIPASRPSMRMVVHMLEEANPYALPTMTIDG 968
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2496 968 SUPERFAMILY L domain-like 361 667 - -
Dere02g2496 968 Gene3D Phosphorylase Kinase; domain 1 651 759 - -
Dere02g2496 968 SMART LRR_typ_2 408 432 IPR003591 -
Dere02g2496 968 SMART LRR_typ_2 480 503 IPR003591 -
Dere02g2496 968 SMART LRR_typ_2 217 241 IPR003591 -
Dere02g2496 968 SMART LRR_typ_2 312 336 IPR003591 -
Dere02g2496 968 SMART LRR_typ_2 168 193 IPR003591 -
Dere02g2496 968 SMART LRR_typ_2 120 143 IPR003591 -
Dere02g2496 968 SMART LRR_typ_2 528 551 IPR003591 -
Dere02g2496 968 FunFam Leucine-rich receptor-like protein kinase family protein 285 380 - -
Dere02g2496 968 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 760 963 - -
Dere02g2496 968 FunFam Inactive leucine-rich repeat receptor-like protein kinase 381 474 - -
Dere02g2496 968 CDD STKc_IRAK 674 955 - -
Dere02g2496 968 Gene3D Ribonuclease Inhibitor 285 607 IPR032675 -
Dere02g2496 968 SMART serkin_6 668 960 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g2496 968 Pfam Leucine rich repeat N-terminal domain 31 68 IPR013210 -
Dere02g2496 968 SUPERFAMILY L domain-like 70 423 - -
Dere02g2496 968 Gene3D Ribonuclease Inhibitor 188 284 IPR032675 -
Dere02g2496 968 FunFam Receptor-like protein kinase HAIKU2 651 759 - -
Dere02g2496 968 Pfam Protein kinase domain 670 951 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g2496 968 ProSitePatterns Protein kinases ATP-binding region signature. 674 696 IPR017441 GO:0005524
Dere02g2496 968 Gene3D Transferase(Phosphotransferase) domain 1 760 960 - -
Dere02g2496 968 FunFam Leucine-rich receptor-like protein kinase family protein 188 284 - -
Dere02g2496 968 FunFam Probable inactive receptor kinase RLK902 29 187 - -
Dere02g2496 968 Pfam Leucine rich repeat 506 564 IPR001611 GO:0005515
Dere02g2496 968 Gene3D Ribonuclease Inhibitor 29 187 IPR032675 -
Dere02g2496 968 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 213 955 - -
Dere02g2496 968 ProSiteProfiles Protein kinase domain profile. 668 960 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g2496 968 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 475 596 - -
Dere02g2496 968 ProSitePatterns Serine/Threonine protein kinases active-site signature. 804 816 IPR008271 GO:0004672|GO:0006468
Dere02g2496 968 SUPERFAMILY Protein kinase-like (PK-like) 653 954 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2496 Dere-ChrDere02 27277477 27280998 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2496 19 966 Receptor kinase-like Gene Family AT1G09970 57.128 0.0 1042
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Dere02g2496 Pkinase 5.6e-44 CL0016