Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2483 ATGGAGAACTATTCGTACCCTTCGTACCCAGATTCAGGCGACTCGTCCCCGCGTTCTAGAGAGGTTGAATTCGAGAACCCTCCGCCATGGGATGACCAGCAACCGCCGCCCAATTACAAAGCTAAATTCATGTGCAGCTATGGCGGAAAGATCCAGCCTCGCACCCACGACAACCAGCTTTCCTACGTCGGCGGCGAGACCAAGATCCTCGCCGTCGACCTCAACATCAAGTTCTCCGTCATGATTTCCAAGCTCTCCGCCATCTGCGATGGCGCTGACGTCACCTTCAAGTACCAGCTCCCCGGCGAAGAGCTCGACGCTCTGATTTCCGTCAGCAACGACGACGATCTCGAACACATGATGCACGAGTATGATCGCCTGTACCGTGCTTCCGCGAAGCCCGCTCGTATGAGGCTCTTCATCTTCCCTGTCAATAACAACCAGCCGGCGAGTTTTGAGTCCGATCAGGACCGCTTCGTGGAATCTCTCAACACGGGTCCGGGTCCTACTCCTCCCGACCCGGTTAAGCCCGCGCCAAATATCCCTGGTAGCAACGTCGACTTTCTCTTCGGTCTGGAGAAAGGAGTTCCTGCGGCGCAGCCACCGCCGACAGCCGTGAAGTATCACGATCCAGTTCCAGGACCGGTGGTGCCACCACCAGAGTACCAGGTACGTGGAGGCCCTGAACGGGTGGTCGGGTCGGACCCTGCAGTGAACCCAGTTGAGATTCAAAGGCAGTTCCAGAAGATGCAAATTGGGGAGCATGATCAACTTGTGTATCGCCGAAAGAGCGAGGATGGTACATCAGGAGGATATGCCGCCGGAGATTATTATGTTCAGAAGTTCACAGAAAAAGCTCCGTCGTCGAGTTTTCCGGCCAACGCGCCGCACCCTGGTAGTTATTGGCCGGAAAAACAAGTTTCCAATGAGAGCTTTACGCCGACGGCAGCGTCAGGCGGACCCGGAGGAGCAGACCAGCCGGTTTATGTAATCCCACCGCCAGGAACATTCTATCACGCGCCACCGGTGGTTCGTCCATCGGCGGCACCAGCCACCCAAGGTTACTACACAGTGCATCGAATGGTCTCTGATGCTTACCGTGAACAGCCGGTTTACAGCGCAGCGCCGCCTCCCCGAGCGCCATTTTCCTCAGCGACTCCGTCGACCTTGGCAACGGCTCAGCCGGTTAAACCCTCCGCGTACACAGAAGGATTCAGCGTCGTTCGTCAACCTGGGATGCCGGATAACTCAGCTGCGTATGCGCAGGTGGCGTACGATAGTGCAGGTGGGAGACAGTTTTACTATACTGCGCCGGGAGGAGTGGCGCACCCGCCGCCGTACCAAGGGGTTGCTCCGGCTGTCGGTGCTGACGTAAGACCAGTTGGTGTATCACTGGGCCAGGATCTTAAGGTGGTAAACAAGGTGTCTCAAGGTTCGGGGTGA 1443 0.571 MENYSYPSYPDSGDSSPRSREVEFENPPPWDDQQPPPNYKAKFMCSYGGKIQPRTHDNQLSYVGGETKILAVDLNIKFSVMISKLSAICDGADVTFKYQLPGEELDALISVSNDDDLEHMMHEYDRLYRASAKPARMRLFIFPVNNNQPASFESDQDRFVESLNTGPGPTPPDPVKPAPNIPGSNVDFLFGLEKGVPAAQPPPTAVKYHDPVPGPVVPPPEYQVRGGPERVVGSDPAVNPVEIQRQFQKMQIGEHDQLVYRRKSEDGTSGGYAAGDYYVQKFTEKAPSSSFPANAPHPGSYWPEKQVSNESFTPTAASGGPGGADQPVYVIPPPGTFYHAPPVVRPSAAPATQGYYTVHRMVSDAYREQPVYSAAPPPRAPFSSATPSTLATAQPVKPSAYTEGFSVVRQPGMPDNSAAYAQVAYDSAGGRQFYYTAPGGVAHPPPYQGVAPAVGADVRPVGVSLGQDLKVVNKVSQGSG 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2483 480 Gene3D - 61 142 - -
Dere02g2483 480 CDD PB1_UP2 44 142 - -
Dere02g2483 480 MobiDBLite consensus disorder prediction 1 15 - -
Dere02g2483 480 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 60 144 - -
Dere02g2483 480 MobiDBLite consensus disorder prediction 1 36 - -
Dere02g2483 480 Pfam PB1 domain 56 143 IPR000270 GO:0005515
Dere02g2483 480 PANTHER OS05G0427100 PROTEIN-RELATED 9 383 - -
Dere02g2483 480 SUPERFAMILY CAD & PB1 domains 56 151 - -
Dere02g2483 480 SMART PB1_new 55 144 IPR000270 GO:0005515
Dere02g2483 480 MobiDBLite consensus disorder prediction 287 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2483 Dere-ChrDere02 27025529 27026971 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2483 39 165 MAP Kinase Kinase Kinase AT5G57610 42.537 5.26e-26 110