Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2468 ATGAAAAAGGTGAGAATAGAGCTGGACATTAGACAGCGACATCTTTCAAAGCCATCACTAGTGAGATCAATATCAACGAGGAAGGAAAATGGCAGTAGAGAAAATGGGTTTATGCATACGACTTGGGAGGAAGATCAGACTAGAGGAGGTGATTTGGGGAAGAACAGGGAGTTGGGGGAGGATGATGATCGACCAAGAACAGAGAGACTGCAGATGGGGAGGAAGACGCTAAGATGACAGGCAAGAAAGGACGTGACTCCAGTTGCTTCTGTGGAAACAAAATGTTGCTGCAGGAATTTGATGCTGTCTGATGAAGTGATTATGTATTTGCTGCAGTCACCTTCTGGCATTTCCAAACTCCGACAAGGAAACTTGAAAGTTAGGAATTTCAAGTCCTTGAGACCAGAGAAAACGGCTGTAATAAACAATTATATTGCAGTAATTGAACCATCTTGGAGGCAGCGCAACCCTCCGAGGGTTCCCAATCTTATTGGAGGCAGATTTGTTGATTCACAGTCATTCACATCAATTGATATATTAAACCCTGCAAGCCAACAAGTTGTTTCTCAAATTCCAATGACTACACATGAGGAGTTTAAAGCTGCTGTTTTTGGAGCAAAACGTGCTTTTTCAATGTGGCGTAACACACCACTTAGAACGCGACAGAAGATCATGTATAAGTTCCAAGAGCTTATCCGTAGAGACATTGATAAGATTGCTATGAATATTACTATTGAACATGGCAAAACACTGCAAGATGCATATGGTGATTTGTTACATGGGCTAGAGGTCGTTGAACAAGTATGTGGTCTGGGAAATCTGCAAACTGGGGAATTTGTTCCTAATGTGTCCAATGGCATTGACACATACAGCATTAGGGAACCTCTTGGTGTTTGTGCTGGGATCTGCTCTTTTGACTTTCCAGCTATGATTCCCTTATGGATGTTTCCTATTGCTGTCACTTGTGGCAATACATTTATTCTAAGGCCATCAGAGATGAATCCAGGGGCATCTTTGATGCTGGCTGAGTTAGCAATAGAGGCTGGCCTACCTAATGGTGTGTTAAATATTGTTCATGGTACAAATGACATTTTCAATGCTATCTGTGATGATGATGATATCAAGGCTATCTCATTTGTTGGTACAAATGCAGTTGGTTCATATGTATATGCCAGAGCATCAGCTAAAGGGAAACGTGTTCAGTCCAATATTGGAGCAAAAAATCATGCTGTTGTAATGCCTGATGCAAGAATGGATGCTACTTTGCAAGCCCTAGTTGCATCTGGTTTTGGTGCTGCTGGACAAAAGTGCACAACTCTGAGTGCTGTTATATTTGTTGGAAGTTTCAACAAATGGGAAGATAAACTGGTACAGCGTGCTAAAGCACTGAAGGTAAACGCTGGAACAGAACCACGTACAGGCCTTGGTCCAGTTATAAGCAAAGAGGCAAAGGAACACACTTTCAGATTGATTAAAACGGCAGTGGAATCTGGTGCGAGACTAGTTCTTGATGGAAGAAATATTGTGGTTCCAGGATATGAACATGGAAACTTCATAGGTCCCACCATCTTATCTGATGTCACAGTTAACATGGAGTGCTACAAGGAGGAAATTATTGGTCCAATTCTTCTTTGTATGCAGGTTGACAGCATAGAAGAGGCCATAAACATCATCAATAGAAACAAATATGGTAATGGAGCTTTTATATATACATCTTCTGCGGCAGCAGCAAGGAAATTCCAGAATGAGGTTGAAGTAAGGCAGGTTGGCATAAATGTTTCAATTTCGGTTTCATTGCCTTTTTCCTCATTTATAAGCTCCAAGCCGTCTTTTGCTGGTGATTTGAACTTTGATGGCAAGGCAGAACTTCAGTTTTACACCCAGATCAAGACAGTGACTCAACAATGGAAAGACTGA 1917 0.4152 MKKVRIELDIRQRHLSKPSLVRSISTRKENGSRENGFMHTTWEEDQTRGGDLGKNRELGEDDDRPRTERLQMGRKTLRXQARKDVTPVASVETKCCCRNLMLSDEVIMYLLQSPSGISKLRQGNLKVRNFKSLRPEKTAVINNYIAVIEPSWRQRNPPRVPNLIGGRFVDSQSFTSIDILNPASQQVVSQIPMTTHEEFKAAVFGAKRAFSMWRNTPLRTRQKIMYKFQELIRRDIDKIAMNITIEHGKTLQDAYGDLLHGLEVVEQVCGLGNLQTGEFVPNVSNGIDTYSIREPLGVCAGICSFDFPAMIPLWMFPIAVTCGNTFILRPSEMNPGASLMLAELAIEAGLPNGVLNIVHGTNDIFNAICDDDDIKAISFVGTNAVGSYVYARASAKGKRVQSNIGAKNHAVVMPDARMDATLQALVASGFGAAGQKCTTLSAVIFVGSFNKWEDKLVQRAKALKVNAGTEPRTGLGPVISKEAKEHTFRLIKTAVESGARLVLDGRNIVVPGYEHGNFIGPTILSDVTVNMECYKEEIIGPILLCMQVDSIEEAINIINRNKYGNGAFIYTSSAAAARKFQNEVEVRQVGINVSISVSLPFSSFISSKPSFAGDLNFDGKAELQFYTQIKTVTQQWKD 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2468 638 MobiDBLite consensus disorder prediction 26 65 - -
Dere02g2468 638 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 118 638 IPR010061 GO:0004491
Dere02g2468 638 FunFam Methylmalonate-semialdehyde dehydrogenase (Acylating) 405 605 - -
Dere02g2468 638 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 405 605 IPR016163 GO:0016620
Dere02g2468 638 FunFam Methylmalonate-semialdehyde dehydrogenase [acylating] 164 411 - -
Dere02g2468 638 Pfam Aldehyde dehydrogenase family 168 632 IPR015590 GO:0016491
Dere02g2468 638 CDD ALDH_F6_MMSDH 160 636 IPR010061 GO:0004491
Dere02g2468 638 SUPERFAMILY ALDH-like 152 636 IPR016161 GO:0016491
Dere02g2468 638 MobiDBLite consensus disorder prediction 27 65 - -
Dere02g2468 638 NCBIfam CoA-acylating methylmalonate-semialdehyde dehydrogenase 162 636 IPR010061 GO:0004491
Dere02g2468 638 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 164 611 IPR016162 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2468 Dere-ChrDere02 26752486 26765563 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2468 129 620 Aldehyde Dehydrogenase Gene Family AT2G14170 68.154 0.0 706