Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2447 ATGGGAGAGACAGATTCTTCAATGGGTAGATCGGAGGAAGAAGAAGGCACAAAGAGGCAGAAGATTGATCTCTCTTTGAAGATAGATCACACTGAACAAGAAGAAGAAGAAGAAGAAGAAGATGATGATGATGATGACAAGGAAGACATGGCATCACAAGTAGTGAAGGATGACAAGGAAGAAGCTACTCATGAAGCCACCACAGCTGCAGAAGATCAAATAGAAGAAGAAGAAGATGATGGATCAATGGCAGATACAGCTTTGCAGGAAAACACTAAAACAAGAGAGCAGTTAAGTGTGTTACAAAGGGAGACAGATCGCATGAAAGAAGAAAACGAAGTTTTAAGGAAAGTGGTGGAGAAAACGATGAAAGACTACTATGATCTTCAGATGAAATTTGCAGTCATCCAGCAGAACCAAAACAAGAAGAAAAAGGACCCTCAAATTTCTCTCTCACTTCAAAACAATGGAAATGATGATGATAGCACAAGGGAGATTGGATTGGGATTATCACTAAGGTTACAGACAAGCAGTTCAAAACAAGAAGAAGAAATGGAAGAAAATTATAAAGAAGAGGAGAAGAATAAGGAATTAGAACTGGCAAGTTTTGGATCATCATCGGTGCAGAACAAAATACCTCGAATTAGTTATCATGATTTGCCTGGTATCAATAATCCCCACGTTGCTTCATCACCTCCTCATAGAAAGGCTAGGGTCTCCGTTAGAGCAAGATGTGAAGCAGCTACAATGAATGATGGGTGTCAATGGAGAAAATATGGACAAAAAATTGCAAAAGGAAACCCATGTCCTCGTGCATATTATCGTTGCACCGTAGCCCCTGGCTGCCCAGTTAGAAAACAGGTGCAAAGATGCTTAGAGGACATGTCCATACTAATCACAACCTATGAAGGAACACACAACCATCCTCTTCCAGTGGGCGCAACAGCCATGGCTTCCACTGCAAGTGCAGCTGCTTCCTTTATGTTACTAGACTCCAGCAACCCTATCTCCCATGGCACCTCCACATTCACCCAAGCCACCCTTCCTAATTACAGCCATAATAACAACATTTTCCACCCTCTAAACCCTAATGATCCATCTAAAGGCATTGTCCTTGATCTAACATCAACCGTTCCGGCCGGGCCTCAGCCACCGGTATTTTCTCGGATGCCAAACAGACAGGCGAACAATATTCCCGGCACAAGAGAGGAAAATAATCAGGGTCTAGGGCTAGGGCTGCCATTAGGGGATCAGCATAGTGTGTCTGCAATTACCTCAGATCCTAGGTTTAGGGTTGCTGTGGCTGCAGCCATAACATCGCTCATGAATAATAATAATAAAGAAAGCCATCATAATCATATTAATCCTATAGGGACTTCTTTTGGTGCTGGAAATAATAGTAATTATGGCCAAATTAATGGTAGCTCTAGCAGCAGCAGCAGCAACAAATGGATTCTAGAGTCTCTTTCATCACCAAATGGGAAACCCACTTGA 1494 0.4237 MGETDSSMGRSEEEEGTKRQKIDLSLKIDHTEQEEEEEEEDDDDDDKEDMASQVVKDDKEEATHEATTAAEDQIEEEEDDGSMADTALQENTKTREQLSVLQRETDRMKEENEVLRKVVEKTMKDYYDLQMKFAVIQQNQNKKKKDPQISLSLQNNGNDDDSTREIGLGLSLRLQTSSSKQEEEMEENYKEEEKNKELELASFGSSSVQNKIPRISYHDLPGINNPHVASSPPHRKARVSVRARCEAATMNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCLEDMSILITTYEGTHNHPLPVGATAMASTASAAASFMLLDSSNPISHGTSTFTQATLPNYSHNNNIFHPLNPNDPSKGIVLDLTSTVPAGPQPPVFSRMPNRQANNIPGTREENNQGLGLGLPLGDQHSVSAITSDPRFRVAVAAAITSLMNNNNKESHHNHINPIGTSFGAGNNSNYGQINGSSSSSSSNKWILESLSSPNGKPT 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2447 497 Gene3D WRKY domain 235 312 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere02g2447 497 MobiDBLite consensus disorder prediction 389 404 - -
Dere02g2447 497 MobiDBLite consensus disorder prediction 468 497 - -
Dere02g2447 497 MobiDBLite consensus disorder prediction 49 70 - -
Dere02g2447 497 MobiDBLite consensus disorder prediction 140 165 - -
Dere02g2447 497 SUPERFAMILY WRKY DNA-binding domain 243 311 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere02g2447 497 Coils Coil 21 41 - -
Dere02g2447 497 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 75 452 IPR044810 GO:0003700
Dere02g2447 497 Coils Coil 84 121 - -
Dere02g2447 497 MobiDBLite consensus disorder prediction 381 410 - -
Dere02g2447 497 MobiDBLite consensus disorder prediction 1 110 - -
Dere02g2447 497 ProSiteProfiles WRKY domain profile. 245 311 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere02g2447 497 Coils Coil 175 202 - -
Dere02g2447 497 MobiDBLite consensus disorder prediction 1 31 - -
Dere02g2447 497 Pfam WRKY DNA -binding domain 251 309 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere02g2447 497 FunFam probable WRKY transcription factor 31 235 312 - -
Dere02g2447 497 MobiDBLite consensus disorder prediction 140 162 - -
Dere02g2447 497 SMART WRKY_cls 250 310 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere02g2447 497 MobiDBLite consensus disorder prediction 32 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2447 Dere-ChrDere02 26403510 26406458 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2447 56 369 WRKY Transcription Factor Family AT1G68150 50.148 5.52e-89 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dere02g2447 WRKY 2e-24 CL0274