Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2436 ATGGAGGGTTTCTGCAACATGTTGAGTGGGTTGAAACCAGTGGTGCTGATGGTGATGGTGCAGATTGTATTTGCAGGGGTGAATGTGGTCTACAAGCTCGCCATTAACGACGGAATGAGCATGAGGATCGCCACTGCGTATCGCCTTCTCTTCGCTTCTGCTTTCACTCTGCCTCTTGCTCTTGTCTTCGAAAGGAACAAGAGACCAAAGCTGACTTGGAGGCTGCTTTTCATGGCATTTCTTTGTGGCTTGTTCGGGGGAAGTTTATTTCAAAATCTCTTCTTTGAGGCTTTGGCTTTGACATCGGCAACATTCGTTTCAGCTATCTATAACCTTATTCCAGCCATCACCTTCATCTTGGCCATCTCCTGCGGCTTTGAGAGATTGAACTTTGGAGCAGCAGGAGGGAAGGCCAAGGTTTTAGGAACTATAATAGGGATTGGTGGGGCAATGCTTCTTACCTTCTTCAAAGGTGTAGAAATTGACATTTGGTCCTCCCACATTAACTTTTTGCACCGCCAAAACGGCACCGCATCATCAGCAACACTACATGCTCACTCAGAACACAGACTGCTTGGCGTTCTCTGTGCCACTGCAAGCTGCTTCTCCTATGCTTTATGGCTTATTATTCAGGCGAAGATGAGTGGAGAGTTCCCAAGCCATCTCACAAACACTGCTTTGATGTCTACAATGGGAGCAATGCAAGCCACTGTGTTTGCTCTTTGTGTTGAGAGAGATTTCAGCCAGTGGAAGTTGGGTTGGAATGTCAGGCTTCTAGCTGTCTCTTACTCGGGAATTGTAGCCTCTGGAGTAATAGTGATTGTGATTGCATGGTGTGTAAGAATGAGAGGTCCACTATTTGCTTCTGTATTCAACCCTCTAATGCTTGTGCTTGTTGCCTTTGCTGCTTCTTTGATGTTGAATGAGAAACTCTATTTAGGAAGTGTGCTTGGAGCATTGCTGATAGTGAGTGGCTTGTACATGGTGTTGTGGGGTAAGAGCAGAGAAATGAGAAAGATGGTTCAGTTGGTGCCGTCAGGAACCACCAAACAAGAATCTGAAGCAATTGAGGTTGTTGTCATGTCAACCAATAATGTCGCAGATCATGATCAAAAGAATGAACAAATCAATATCAATATCGCCAATAATTCAGGTAAAGCTCATGATGAATCACTCAAAAACTGA 1185 0.4481 MEGFCNMLSGLKPVVLMVMVQIVFAGVNVVYKLAINDGMSMRIATAYRLLFASAFTLPLALVFERNKRPKLTWRLLFMAFLCGLFGGSLFQNLFFEALALTSATFVSAIYNLIPAITFILAISCGFERLNFGAAGGKAKVLGTIIGIGGAMLLTFFKGVEIDIWSSHINFLHRQNGTASSATLHAHSEHRLLGVLCATASCFSYALWLIIQAKMSGEFPSHLTNTALMSTMGAMQATVFALCVERDFSQWKLGWNVRLLAVSYSGIVASGVIVIVIAWCVRMRGPLFASVFNPLMLVLVAFAASLMLNEKLYLGSVLGALLIVSGLYMVLWGKSREMRKMVQLVPSGTTKQESEAIEVVVMSTNNVADHDQKNEQININIANNSGKAHDESLKN 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2436 394 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 157 - -
Dere02g2436 394 PANTHER WAT1-RELATED PROTEIN 12 349 IPR030184 GO:0016020|GO:0022857
Dere02g2436 394 Pfam EamA-like transporter family 192 330 IPR000620 GO:0016020
Dere02g2436 394 Pfam EamA-like transporter family 13 154 IPR000620 GO:0016020
Dere02g2436 394 SUPERFAMILY Multidrug resistance efflux transporter EmrE 248 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2436 Dere-ChrDere02 26279775 26283482 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2436 1 364 Nodulin-like Gene Family AT1G68170 43.324 3.73e-100 300
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere02g2434 02 26192317 26197268 Dere02g2436 02 26279775 26283482 CCT
Dere02g2436 02 26279775 26283482 Dere02g2436 02 26279775 26283482 CCT
Dere02g2436 02 26279775 26283482 Dere02g2436 02 26279775 26283482 ECH