Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2434 ATGGCGGATGTGTGGAACGTGGTGCATGGGCTGAAGCCGGCGATGCTGATGGTGGTGGTGCAGATCTCATTCGCCGGCGTCAATGTGATATACAAGCTCGCCGTCGACGACGGCATGAACTTGAGAGTAGTCGTTGCCTACCGCTTTCTTTTCGCCACGGCTTTCATTGCTCCTCTTGCTTTCATCTTAGAAAGGAAGAAGAGACCAAAGATGACTTGGACCATACTGTTTCAGGCATTTCTATGTGGGTTGTTTGGAGGAGCATTGGCACAAAACTTATACTTGGAGGCGTTGGCTCTGACGTCTGCAACGTTTGCTTCGGCCATGGCCAATCTCACTCCAGCCATCACCTTTATGATGGCCGTCTCCTTCCGTTTGGAGAAGCTGAATCTAAGAACAGCGGCAGGAAAAGCCAAGATCATTGGAACACTAACTGGAATAGGTGGGGCCATGGTTCTAACTTTCTTCAAAGGTACACAAATAGACACGGGCTCCTTCCACGTCACCCTCTTACATCACCACAATGGCCACGTGGCATCGGTACACTCTTCCTCCGGTCATAGCACCCTCTTGGGTGCACTCTGTGCTCTGGGGAGCTGCTTCTCTTATGCTTTGTGGCTCATCATTCAGACTAATATGAGTGAGAGATACCCTTGCCATTACTCAAGCACAGCATTGATGTCGTTCATAGGGTCTCTGTCGTCTGTTGTGTTTGCACTTTGCTTTGAGAGGGATTGGAGTCAATGGAAGCTGGGTTGGAATGTTAGGCTTCTCACTGCTGCCTATTCGGGAATAGTGGTTTCCGGAGCAATGGTAGTGGTGATGGCATGGTGTGTGCACATGAGAGGCCCTCTTTTTGTCTCAGTTTTCAACCCGCTAATGCTTGTGATTGTGGCCCTTGCTGGATCGTTCATGCTGAACGAGAAGCTACACCTTGGAAGTGTACTCGGAGGAGCGTTGATAATATGTGGGTTGTACGTGGTTCTATGGGGCAAAAGCAAAGAGATGAAGAAGAAGAATCAACTAGTGCCATCTCAGAGCCTTCATGAAACTGACGCCATCGAAATCATAGTCAGATCATCAGCAGAAGATAAAAGCAATCCCAAAAATGCAGCAGAAGTTGTTAGGAATCCCATTGAAGATTCACCAGAAAGTGAAAGTGAAGTAGTGCACGATTGCCAGAGTAAGAGGAAGAAAGAACAGGAAGACGAAGAAGAAGATGAAGAAGACGAAGTAGTGTCAAGAAATGTCCCCTACACTTAA 1263 0.479 MADVWNVVHGLKPAMLMVVVQISFAGVNVIYKLAVDDGMNLRVVVAYRFLFATAFIAPLAFILERKKRPKMTWTILFQAFLCGLFGGALAQNLYLEALALTSATFASAMANLTPAITFMMAVSFRLEKLNLRTAAGKAKIIGTLTGIGGAMVLTFFKGTQIDTGSFHVTLLHHHNGHVASVHSSSGHSTLLGALCALGSCFSYALWLIIQTNMSERYPCHYSSTALMSFIGSLSSVVFALCFERDWSQWKLGWNVRLLTAAYSGIVVSGAMVVVMAWCVHMRGPLFVSVFNPLMLVIVALAGSFMLNEKLHLGSVLGGALIICGLYVVLWGKSKEMKKKNQLVPSQSLHETDAIEIIVRSSAEDKSNPKNAAEVVRNPIEDSPESESEVVHDCQSKRKKEQEDEEEDEEDEVVSRNVPYT 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2434 420 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 142 - -
Dere02g2434 420 SUPERFAMILY Multidrug resistance efflux transporter EmrE 233 334 - -
Dere02g2434 420 Coils Coil 391 411 - -
Dere02g2434 420 PANTHER WAT1-RELATED PROTEIN 12 341 IPR030184 GO:0016020|GO:0022857
Dere02g2434 420 Pfam EamA-like transporter family 12 140 IPR000620 GO:0016020
Dere02g2434 420 Pfam EamA-like transporter family 191 329 IPR000620 GO:0016020
Dere02g2434 420 MobiDBLite consensus disorder prediction 379 402 - -
Dere02g2434 420 MobiDBLite consensus disorder prediction 362 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2434 Dere-ChrDere02 26192317 26197268 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2434 11 337 Nodulin-like Gene Family AT1G25270 48.476 1.34e-106 317
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere02g2434 02 26192317 26197268 Dere02g2436 02 26279775 26283482 CCT
Dere02g2434 02 26192317 26197268 Dere02g2433 02 26170729 26176598 CCT
Dere02g2434 02 26192317 26197268 Dere02g2434 02 26192317 26197268 ECH