Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2433 ATGGGGCATATATGGAAGGTGATGGATGGGCTGAAGCCAACCATTCTAATGGTGATGGTGCAGTTATCATATGCTGTGATCAATGTTCTGTACAAGCTTGCTGTCAATGAAGGCATGAACTTGCGAGTGGTCATCGCCTACCGCTTTCTTTTCGCTTCTGCTTTCATGGCTCCTCTTGCTCTCCTTCTTGAAAGGTCCTTTTTCGCTTTTACCTTTCATTTTTGTCTTCAGGAAGAAGAGGCCAAAGATGACTTGGACTGTACTGTTTCAGGCGTCACTATGTGGCTTATTTGGACGTTGGCTTTGACGTCAGTAACGTTTTCTTCTGCCATGGCCAATCTTAATCCAGCAGTCACCTTTCTCATGGCCCTCTGCTTCGGATCGGAAAGTTTAAATTTGAGAACAGCAGCAGGGAAAGCAAAGATCATGGGAACACTTGTGGGAATTGGCGGGGCCATGCTTCTCACTTTCTTTAGAGGTGCACAACTTCACACAGGCTCCTTCCACGTCAACCTCCTGCGCCACCATAATGGCCACGTGGCATCACCACACTCTTCCTCTGGTGGTAGCATCATACTGGGTGCACTCTGCGCCCTGGGCAGCAGCCTCTCTACTGCTCTATGGCTAATAGTTCAGGGTAGGATGAGTAAGAAGTACCCAAGCTATTACTCAAGCACATTTTTAATGTCTCTGATGGGATCAGTGATATCTATTGTGTTTGCTCTTTGCCTTGAGAGGGATTGGAGTCAATGGAAGTTGGGATGGAATATTAGGCTTCTCGCCGTGGCTTATGCGGGAATGGGGCCTTCTGGACTAACGGTGGTAATAATTGCATGGTGTGTGTCAATGAGAGGCCCTCTCTTTGTCTCCGTTTTCAGCCCTCTCTTGCTTGTAATTTTGGCCATTGTCGGATCTCTCTTGTTGGAAGAGATGCTACACCTTGGGAGTATAATTGGAGGGGTGCTGATAGTGTGTGGATTATATATGGTTCTATGGGGTAAAGGCAAAGAGATGAAGAAGATGAATCTTTTAATGACATCACAGACCCTCCACGTGTCCCCCAAAGTGGAAATCATTGTCAAATCTTCTCTAGACAGCGACAAATGCAATCACAACAACAATATTAGTCATTCAAATGTTGTTGGGGACCAAGAAGATTCAAAAAATGGAAGTGAAGCAGTGCATAATTGCCCACAATGA 1200 0.4583 MGHIWKVMDGLKPTILMVMVQLSYAVINVLYKLAVNEGMNLRVVIAYRFLFASAFMAPLALLLERSFFAFTFHFCLQEEEAKDDLDCTVSGVTMWLIWTLALTSVTFSSAMANLNPAVTFLMALCFGSESLNLRTAAGKAKIMGTLVGIGGAMLLTFFRGAQLHTGSFHVNLLRHHNGHVASPHSSSGGSIILGALCALGSSLSTALWLIVQGRMSKKYPSYYSSTFLMSLMGSVISIVFALCLERDWSQWKLGWNIRLLAVAYAGMGPSGLTVVIIAWCVSMRGPLFVSVFSPLLLVILAIVGSLLLEEMLHLGSIIGGVLIVCGLYMVLWGKGKEMKKMNLLMTSQTLHVSPKVEIIVKSSLDSDKCNHNNNISHSNVVGDQEDSKNGSEAVHNCPQ 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2433 399 SUPERFAMILY Multidrug resistance efflux transporter EmrE 233 336 - -
Dere02g2433 399 Pfam EamA-like transporter family 193 331 IPR000620 GO:0016020
Dere02g2433 399 PANTHER WAT1-RELATED PROTEIN 13 345 IPR030184 GO:0016020|GO:0022857
Dere02g2433 399 MobiDBLite consensus disorder prediction 370 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2433 Dere-ChrDere02 26170729 26176598 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2433 3 341 Nodulin-like Gene Family AT1G68170 45.322 7.73e-89 271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere02g2434 02 26192317 26197268 Dere02g2433 02 26170729 26176598 CCT
Dere02g2433 02 26170729 26176598 Dere02g2433 02 26170729 26176598 ECH